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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
66001-66050 / 86044 show all
jli-customSNPtiHG002complexvar*
99.9464
99.9180
99.9748
17.5160
50801941750797912858
45.3125
ltrigg-rtg1SNP***
99.8754
99.8921
99.8587
17.5113
3051330329630515184317267
6.1849
ltrigg-rtg1SNPtiHG002complexvar*
99.8532
99.7400
99.9667
17.5108
507114132250703416980
47.3373
bgallagher-sentieonSNPtiHG002complexvar*
99.9558
99.9337
99.9780
17.4939
50809933750803511253
47.3214
gduggal-bwavardSNPtiHG002complexvarhomalt
98.4467
96.9948
99.9428
17.4866
187650581418352610578
74.2857
jmaeng-gatkSNP**homalt
99.5965
99.2051
99.9909
17.4792
11707809381117075710669
65.0943
ndellapenna-hhgaSNPtiHG002complexvar*
99.8069
99.6755
99.9387
17.4775
5067861650506808311223
71.7042
jli-customSNPti*het
99.9331
99.9539
99.9123
17.4772
12813005911281266112587
7.7333
bgallagher-sentieonSNPti**
99.9476
99.9680
99.9272
17.4519
208484466720847811519117
7.7024
hfeng-pmm3SNPtiHG002complexvar*
99.9019
99.8171
99.9868
17.4486
5075069305074466725
37.3134
rpoplin-dv42SNPtiHG002complexvar*
99.9216
99.8731
99.9701
17.4429
507791645507725152130
85.5263
hfeng-pmm2SNPti**
99.9484
99.9340
99.9629
17.4396
20841351376208407777472
9.3023
ltrigg-rtg2SNPtiHG002complexvar*
99.8779
99.7988
99.9570
17.4272
507413102350731621898
44.9541
ciseli-customSNPti*homalt
98.8778
99.5909
98.1749
17.4213
7997543285797240148217334
49.4838
ltrigg-rtg1SNP**homalt
99.9664
99.9480
99.9848
17.4153
11795436141179482179154
86.0335
cchapple-customSNPtiHG002complexvarhomalt
99.8348
99.6852
99.9849
17.4009
1928546091921842925
86.2069
gduggal-snapplatSNPti*homalt
99.4971
99.0644
99.9337
17.3977
7955267513795327528217
41.0985
eyeh-varpipeSNP**homalt
99.9696
99.9699
99.9693
17.3914
11798073551154702355142
40.0000
qzeng-customSNP**homalt
99.6134
99.3243
99.9041
17.3884
1172188797411620901115707
63.4081
hfeng-pmm2SNPtiHG002complexvar*
99.8914
99.8002
99.9829
17.3851
50742010165073618738
43.6782
cchapple-customSNPtiHG002complexvar*
99.8096
99.6932
99.9263
17.3694
5068761560505502373274
73.4584
raldana-dualsentieonSNPtiHG002complexvar*
99.8917
99.7990
99.9846
17.3582
50741410225073547829
37.1795
cchapple-customSNPtiHG002complexvarhet
99.7945
99.6988
99.8903
17.3501
313818948313318344249
72.3837
hfeng-pmm1SNPtiHG002complexvar*
99.8935
99.8000
99.9872
17.3497
50741910175073606531
47.6923
asubramanian-gatkSNPtiHG002complexvarhet
98.4409
96.9492
99.9794
17.3446
30516396033051136321
33.3333
jlack-gatkSNP**homalt
99.9692
99.9511
99.9872
17.3366
1179584577117955615196
63.5762
eyeh-varpipeSNPtiHG002complexvar*
99.8888
99.9038
99.8738
17.3355
507948489484239612191
31.2092
eyeh-varpipeSNPtiHG002complexvarhomalt
99.9332
99.9188
99.9475
17.3280
1933071571807989569
72.6316
ckim-isaacSNP*HG002complexvarhomalt
95.6391
91.6604
99.9788
17.3239
264509240662645635645
80.3571
astatham-gatkSNPtiHG002complexvarhet
98.7599
97.5636
99.9860
17.3084
30709776693070424317
39.5349
mlin-fermikitSNP*HG002complexvarhet
98.1632
96.4217
99.9688
17.2653
4488431665744874414023
16.4286
dgrover-gatkSNP**homalt
99.9839
99.9740
99.9938
17.2643
117985430711798307363
86.3014
jli-customSNP**homalt
99.9850
99.9771
99.9928
17.2570
117989127011798758566
77.6471
hfeng-pmm3SNPti*het
99.9388
99.9112
99.9664
17.2454
12807531138128070343018
4.1861
ckim-isaacINDELD1_5func_cdshomalt
98.6301
97.2973
100.0000
17.2414
7227200
eyeh-varpipeSNPtiHG002complexvarhet
99.8630
99.8948
99.8311
17.2379
314435331297366503109
21.6700
mlin-fermikitSNPtifunc_cdshet
99.4565
98.9887
99.9288
17.2332
841886841860
0.0000
egarrison-hhgaSNPti*het
99.8877
99.8228
99.9527
17.2025
12796192272127962260680
13.2013
astatham-gatkSNP**homalt
99.9742
99.9548
99.9936
17.1971
117962753411796037667
88.1579
bgallagher-sentieonSNP**homalt
99.9858
99.9781
99.9936
17.1960
117990225911798787666
86.8421
ckim-isaacSNPtifunc_cdshomalt
99.4184
98.8436
100.0000
17.1197
521461521400
ckim-dragenSNP**homalt
99.9725
99.9534
99.9917
17.1093
117961155011798219880
81.6327
raldana-dualsentieonSNP**homalt
99.9888
99.9827
99.9949
17.0955
117995720411799436053
88.3333
mlin-fermikitSNP**homalt
98.9666
99.0041
98.9290
17.0911
11684091175311684251264912153
96.0787
egarrison-hhgaSNPti**
99.9062
99.8498
99.9627
17.0848
208237931322082402778200
25.7069
gduggal-bwaplatSNPti*homalt
99.0843
98.2012
99.9834
17.0820
78859314445788346131112
85.4962
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.3981
98.9726
99.8273
17.0487
578657811
100.0000
gduggal-snapvardSNP**homalt
99.4378
98.9468
99.9337
17.0443
1167733124291158113768475
61.8490
ltrigg-rtg1SNPtiHG002complexvarhet
99.8233
99.6823
99.9646
17.0356
313766100031377811123
20.7207
raldana-dualsentieonSNPti**
99.9357
99.9205
99.9510
17.0225
208385316582083794102254
5.2838