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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1314 1315 1316 1317 1318 1319 1320 1321 1322 ... 1720 1721 » 65851-65900 / 86044 show all
egarrison-hhga	SNP	*	HG002complexvar	*	99.8252	99.7002	99.9506	18.9844	752119	2262	752170	372	223	59.9462
ndellapenna-hhga	SNP	*	HG002complexvar	*	99.7910	99.6474	99.9350	18.9550	751721	2660	751769	489	351	71.7791
rpoplin-dv42	SNP	*	HG002complexvar	*	99.9179	99.8694	99.9664	18.9545	753396	985	753221	253	214	84.5850
asubramanian-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.7425	99.4863	100.0000	18.9415	581	3	582	0	0
anovak-vg	SNP	ti	func_cds	homalt	99.1630	98.9384	99.3887	18.9378	5219	56	5203	32	30	93.7500
ckim-isaac	SNP	*	HG002compoundhet	hetalt	96.5807	93.3875	100.0000	18.9325	805	57	805	0	0
ckim-isaac	SNP	tv	HG002compoundhet	hetalt	96.5807	93.3875	100.0000	18.9325	805	57	805	0	0
ltrigg-rtg1	SNP	*	HG002complexvar	*	99.8490	99.7395	99.9587	18.9301	752419	1965	752595	311	136	43.7299
jli-custom	SNP	*	*	het	99.9088	99.9498	99.8677	18.9256	1872647	940	1872558	2480	145	5.8468
ckim-isaac	SNP	tv	HG002complexvar	het	95.8287	92.0463	99.9352	18.9218	138745	11989	138887	90	17	18.8889
bgallagher-sentieon	SNP	*	*	*	99.9296	99.9673	99.8919	18.9151	3053620	999	3053471	3303	195	5.9037
hfeng-pmm3	SNP	*	HG002complexvar	*	99.8875	99.7894	99.9859	18.8968	752792	1589	752645	106	40	37.7358
astatham-gatk	SNP	*	HG002complexvar	het	98.7010	97.4496	99.9850	18.8713	453625	11872	453498	68	28	41.1765
ltrigg-rtg2	SNP	*	HG002complexvar	*	99.8684	99.7896	99.9473	18.8678	752797	1587	752943	397	167	42.0655
dgrover-gatk	SNP	ti	*	het	99.9394	99.9568	99.9221	18.8587	1281337	554	1281283	999	87	8.7087
hfeng-pmm2	SNP	*	HG002complexvar	*	99.8743	99.7689	99.9799	18.8346	752638	1743	752495	151	59	39.0728
raldana-dualsentieon	SNP	*	HG002complexvar	*	99.8769	99.7713	99.9826	18.8281	752656	1725	752511	131	47	35.8779
mlin-fermikit	SNP	ti	HG002complexvar	homalt	98.3813	98.4958	98.2669	18.8239	190554	2910	190572	3361	3261	97.0247
mlin-fermikit	SNP	ti	func_cds	homalt	99.5745	99.8294	99.3210	18.8179	5266	9	5266	36	34	94.4444
hfeng-pmm2	SNP	*	*	*	99.9416	99.9254	99.9579	18.8175	3052339	2280	3052202	1287	114	8.8578
hfeng-pmm1	SNP	*	HG002complexvar	*	99.8780	99.7704	99.9859	18.8078	752649	1732	752504	106	51	48.1132
jpowers-varprowl	SNP	ti	HG002complexvar	*	99.5182	99.3169	99.7203	18.7923	504961	3473	505119	1417	799	56.3867
ciseli-custom	SNP	ti	HG002complexvar	*	96.3915	97.0905	95.7026	18.7897	493644	14793	488642	21942	5540	25.2484
gduggal-snapvard	SNP	*	HG002complexvar	homalt	98.1658	96.5628	99.8230	18.7873	278656	9919	269038	477	269	56.3941
ckim-vqsr	SNP	ti	HG002complexvar	homalt	98.3712	96.8046	99.9893	18.7775	187281	6182	187271	20	20	100.0000
gduggal-snapfb	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	25.0000	14.4578	92.3077	18.7500	12	71	12	1	1	100.0000
cchapple-custom	SNP	*	HG002complexvar	het	99.7839	99.6872	99.8808	18.7433	464041	1456	463256	553	394	71.2477
gduggal-bwaplat	SNP	*	*	homalt	98.9364	97.9135	99.9810	18.7279	1155537	24624	1155217	220	194	88.1818
gduggal-bwavard	SNP	ti	HG002complexvar	het	98.2415	97.2329	99.2714	18.7202	306056	8710	302050	2217	1521	68.6062
mlin-fermikit	SNP	tv	*	het	98.7020	97.6537	99.7731	18.7114	577821	13883	577760	1314	14	1.0655
mlin-fermikit	SNP	*	HG002complexvar	*	98.2239	97.1863	99.2840	18.6883	733159	21226	733074	5287	5014	94.8364
hfeng-pmm3	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.4836	98.9726	100.0000	18.6798	578	6	579	0	0
hfeng-pmm1	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.4836	98.9726	100.0000	18.6798	578	6	579	0	0
cchapple-custom	SNP	*	HG002complexvar	*	99.8003	99.6796	99.9214	18.6735	751964	2417	749599	590	426	72.2034
asubramanian-gatk	SNP	ti	HG002complexvar	homalt	98.1740	96.4210	99.9920	18.6413	186539	6924	186529	15	15	100.0000
ckim-isaac	SNP	ti	HG002compoundhet	hetalt	96.2366	92.7461	100.0000	18.6364	537	42	537	0	0
gduggal-bwavard	SNP	*	HG002complexvar	homalt	98.4291	96.9651	99.9379	18.6318	279817	8758	270523	168	110	65.4762
qzeng-custom	SNP	ti	HG002complexvar	homalt	99.2303	98.6432	99.8245	18.6252	190839	2625	186005	327	247	75.5352
eyeh-varpipe	SNP	ti	HG002compoundhet	hetalt	99.8980	99.8273	99.9687	18.5958	578	1	6398	2	1	50.0000
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.3971	98.8014	100.0000	18.5915	577	7	578	0	0
ckim-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.3971	98.8014	100.0000	18.5915	577	7	578	0	0
ltrigg-rtg2	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	86.1876	77.6398	96.8504	18.5897	125	36	123	4	4	100.0000
astatham-gatk	SNP	ti	*	het	99.3889	98.8086	99.9762	18.5890	1266618	15273	1266563	302	60	19.8675
hfeng-pmm3	SNP	*	*	het	99.9317	99.8994	99.9639	18.5779	1871702	1885	1871578	675	30	4.4444
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.8285	99.6575	100.0000	18.5754	582	2	583	0	0
cchapple-custom	SNP	*	HG002complexvar	homalt	99.8273	99.6680	99.9871	18.5601	287616	958	286343	37	32	86.4865
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.1364	98.2877	100.0000	18.5552	574	10	575	0	0
dgrover-gatk	SNP	*	HG002complexvar	het	99.9434	99.9156	99.9712	18.5452	465104	393	464974	134	53	39.5522
gduggal-bwafb	SNP	*	*	homalt	99.9194	99.8626	99.9762	18.5273	1178541	1621	1178572	280	175	62.5000
hfeng-pmm2	SNP	ti	HG002complexvar	homalt	99.9798	99.9757	99.9840	18.5051	193416	47	193407	31	31	100.0000

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