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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1270 1271 1272 1273 1274 1275 1276 1277 1278 ... 1720 1721 » 63651-63700 / 86044 show all
hfeng-pmm3	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
jlack-gatk	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
hfeng-pmm1	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
hfeng-pmm2	INDEL	D16_PLUS	tech_badpromoters	*	100.0000	100.0000	100.0000	33.3333	4	0	4	0	0
hfeng-pmm2	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
hfeng-pmm2	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	95.6522	91.6667	100.0000	33.3333	11	1	12	0	0
cchapple-custom	INDEL	D16_PLUS	tech_badpromoters	*	100.0000	100.0000	100.0000	33.3333	4	0	4	0	0
cchapple-custom	INDEL	I6_15	func_cds	homalt	96.7742	100.0000	93.7500	33.3333	15	0	15	1	1	100.0000
ckim-dragen	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	95.6522	91.6667	100.0000	33.3333	11	1	12	0	0
ciseli-custom	INDEL	D1_5	tech_badpromoters	het	60.0000	75.0000	50.0000	33.3333	6	2	6	6	2	33.3333
qzeng-custom	INDEL	I6_15	func_cds	het	77.4194	100.0000	63.1579	33.3333	24	0	24	14	2	14.2857
qzeng-custom	INDEL	*	func_cds	hetalt	75.0000	60.0000	100.0000	33.3333	3	2	2	0	0
mlin-fermikit	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
mlin-fermikit	SNP	tv	tech_badpromoters	het	92.0635	87.8788	96.6667	33.3333	29	4	29	1	0	0.0000
ndellapenna-hhga	INDEL	D16_PLUS	tech_badpromoters	*	100.0000	100.0000	100.0000	33.3333	4	0	4	0	0
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	homalt	96.2963	100.0000	92.8571	33.3333	13	0	13	1	1	100.0000
rpoplin-dv42	INDEL	D16_PLUS	tech_badpromoters	*	100.0000	100.0000	100.0000	33.3333	4	0	4	0	0
raldana-dualsentieon	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
mlin-fermikit	INDEL	D1_5	tech_badpromoters	het	87.5000	87.5000	87.5000	33.3333	7	1	7	1	1	100.0000
eyeh-varpipe	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	*	84.4279	81.5933	87.4666	33.3286	20023	4517	20601	2952	2912	98.6450
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	*	93.9157	91.6952	96.2464	33.3267	22502	2038	22436	875	753	86.0571
ckim-isaac	INDEL	I16_PLUS	HG002compoundhet	hetalt	65.1901	48.5428	99.2149	33.3115	1016	1077	1011	8	7	87.5000
gduggal-snapvard	SNP	*	func_cds	het	99.2494	99.0323	99.4675	33.3113	11053	108	11020	59	21	35.5932
ltrigg-rtg2	SNP	ti	HG002compoundhet	*	99.3879	98.9873	99.7918	33.3089	17301	177	17255	36	13	36.1111
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.5627	95.6563	99.5467	33.3070	10020	455	10102	46	45	97.8261
gduggal-bwavard	INDEL	I1_5	*	homalt	95.1435	90.7626	99.9687	33.2973	54846	5582	54343	17	11	64.7059
hfeng-pmm3	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.5563	93.4447	99.8823	33.2941	1511	106	1697	2	2	100.0000
gduggal-snapvard	INDEL	D6_15	HG002compoundhet	*	59.7955	51.4782	71.3183	33.2912	4649	4382	4896	1969	1719	87.3032
jlack-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	95.9073	92.8033	99.2261	33.2760	1109	86	1154	9	8	88.8889
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.3616	98.9595	99.7670	33.2686	1712	18	1713	4	3	75.0000
hfeng-pmm2	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.9452	99.9635	99.9270	33.2602	2737	1	2737	2	1	50.0000
ckim-dragen	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	het	99.8389	99.9596	99.7185	33.2528	2477	1	2480	7	3	42.8571
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	83.6839	72.6708	98.6312	33.2487	1287	484	1297	18	13	72.2222
asubramanian-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	95.2667	91.9260	98.8593	33.2487	2334	205	2860	33	31	93.9394
hfeng-pmm3	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.4355	95.0263	99.9701	33.2469	9954	521	10036	3	2	66.6667
ckim-isaac	INDEL	D6_15	*	hetalt	90.6237	83.9246	98.4851	33.2460	6860	1314	7281	112	99	88.3929
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9875	100.0000	99.9749	33.2441	3987	0	3987	1	1	100.0000
ltrigg-rtg1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	92.0444	86.0070	98.9933	33.2437	1469	239	1475	15	15	100.0000
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.5196	93.9394	99.2455	33.2429	1519	98	1710	13	13	100.0000
ckim-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.5196	93.9394	99.2455	33.2429	1519	98	1710	13	13	100.0000
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.1607	93.4776	99.0024	33.2299	8685	606	8733	88	82	93.1818
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.1607	93.4776	99.0024	33.2299	8685	606	8733	88	82	93.1818
gduggal-snapfb	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	68.0898	55.0736	89.1626	33.2237	711	580	362	44	24	54.5455
gduggal-bwaplat	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	88.7324	79.7468	100.0000	33.2155	189	48	189	0	0
egarrison-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	73.8603	58.8768	99.0735	33.2105	4812	3361	4491	42	36	85.7143
hfeng-pmm1	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	99.2238	98.4595	100.0000	33.1973	1470	23	1473	0	0
gduggal-snapvard	INDEL	D6_15	HG002compoundhet	het	67.0812	63.3178	71.3203	33.1905	542	314	4894	1968	1718	87.2967
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.4632	95.4749	99.5360	33.1882	10001	474	10083	47	46	97.8723
ltrigg-rtg1	SNP	*	HG002compoundhet	homalt	98.8047	97.7741	99.8572	33.1849	10542	240	10491	15	8	53.3333

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