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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1251 1252 1253 1254 1255 1256 1257 1258 1259 ... 1720 1721 » 62701-62750 / 86044 show all
raldana-dualsentieon	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	*	99.0674	99.0875	99.0472	37.3044	7384	68	7381	71	0	0.0000
ndellapenna-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	64.0965	47.4352	98.7989	37.2929	3403	3771	2879	35	30	85.7143
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	99.9420	99.9130	99.9710	37.2906	3447	3	3443	1	1	100.0000
egarrison-hhga	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	99.2558	98.8879	99.6265	37.2904	6669	75	6668	25	12	48.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	82.5065	98.1366	71.1712	37.2881	158	3	158	64	64	100.0000
egarrison-hhga	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.3197	98.9592	99.6829	37.2866	11314	119	11317	36	17	47.2222
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	89.8955	81.6456	100.0000	37.2822	516	116	540	0	0
egarrison-hhga	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	het	99.4116	99.0616	99.7639	37.2813	4645	44	4649	11	5	45.4545
rpoplin-dv42	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9248	99.9248	99.9248	37.2719	3984	3	3984	3	3	100.0000
ltrigg-rtg2	INDEL	I16_PLUS	HG002compoundhet	hetalt	90.2840	82.6087	99.5316	37.2520	1729	364	1700	8	8	100.0000
mlin-fermikit	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	het	98.3589	97.3161	99.4242	37.2504	6563	181	6562	38	5	13.1579
ndellapenna-hhga	SNP	ti	HG002compoundhet	het	98.2624	96.9805	99.5786	37.2500	9218	287	9216	39	21	53.8462
ltrigg-rtg2	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.1654	99.5545	98.7794	37.2444	18102	81	18127	224	7	3.1250
jlack-gatk	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.5118	99.8232	99.2024	37.2444	7342	13	7338	59	5	8.4746
hfeng-pmm1	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	*	99.6121	99.2918	99.9344	37.2432	10656	76	10656	7	1	14.2857
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	94.1124	89.0961	99.7271	37.2432	621	76	731	2	2	100.0000
ltrigg-rtg2	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	90.9072	83.7989	99.3333	37.2385	150	29	149	1	1	100.0000
hfeng-pmm2	SNP	ti	HG002compoundhet	het	96.7284	93.7822	99.8656	37.2373	8914	591	8916	12	1	8.3333
gduggal-snapplat	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	homalt	93.2439	87.5263	99.7608	37.2372	1249	178	1251	3	0	0.0000
gduggal-bwafb	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	84.7595	74.5335	98.2379	37.2350	1358	464	669	12	12	100.0000
eyeh-varpipe	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	52.1457	98.9446	35.4015	37.2279	375	4	388	708	669	94.4915
jpowers-varprowl	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	73.4486	61.1425	91.9567	37.2269	4431	2816	4413	386	340	88.0829
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	95.9223	92.1642	100.0000	37.2242	5434	462	5491	0	0
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	95.9223	92.1642	100.0000	37.2242	5434	462	5491	0	0
astatham-gatk	INDEL	I6_15	HG002compoundhet	*	94.7145	93.3113	96.1606	37.2227	8189	587	8190	327	325	99.3884
anovak-vg	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	homalt	97.9681	98.4772	97.4643	37.2197	2716	42	2729	71	52	73.2394
ndellapenna-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	73.2832	58.3269	98.5549	37.2051	753	538	682	10	8	80.0000
gduggal-bwafb	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	*	99.3744	99.5648	99.1847	37.2000	3889	17	3893	32	7	21.8750
ltrigg-rtg2	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.5007	97.2896	99.7423	37.1878	2728	76	2709	7	7	100.0000
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	77.4166	67.7028	90.3846	37.1872	4857	2317	658	70	69	98.5714
dgrover-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.9833	96.5224	99.4891	37.1848	1249	45	1363	7	7	100.0000
ndellapenna-hhga	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	*	99.2708	98.9378	99.6061	37.1789	10618	114	10620	42	29	69.0476
ciseli-custom	INDEL	*	func_cds	*	84.1100	83.3708	84.8624	37.1758	371	74	370	66	30	45.4545
mlin-fermikit	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	98.1542	97.8551	98.4553	37.1727	3376	74	3378	53	35	66.0377
egarrison-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	83.3079	82.7701	83.8526	37.1677	15113	3146	15179	2923	2748	94.0130
ndellapenna-hhga	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.4656	99.3180	99.6136	37.1650	6699	46	6703	26	25	96.1538
raldana-dualsentieon	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.3283	99.2191	99.4377	37.1644	18041	142	18038	102	2	1.9608
hfeng-pmm1	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.5502	99.2026	99.9003	37.1632	18038	145	18035	18	3	16.6667
gduggal-snapvard	SNP	*	HG002compoundhet	homalt	89.8866	82.8510	98.2279	37.1566	8933	1849	7594	137	100	72.9927
gduggal-bwafb	INDEL	D1_5	func_cds	*	98.7421	98.7421	98.7421	37.1542	157	2	157	2	1	50.0000
eyeh-varpipe	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	98.8379	99.8261	97.8691	37.1532	3444	6	3215	70	7	10.0000
gduggal-snapvard	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	het	37.8106	46.6667	31.7797	37.1505	63	72	300	644	513	79.6584
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	74.4244	62.1108	92.8275	37.1477	3631	2215	8943	691	673	97.3951
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	74.4244	62.1108	92.8275	37.1477	3631	2215	8943	691	673	97.3951
ltrigg-rtg2	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	95.4545	91.3043	100.0000	37.1429	21	2	22	0	0
ghariani-varprowl	INDEL	D16_PLUS	HG002compoundhet	het	34.2987	89.1358	21.2349	37.1418	361	44	368	1365	1360	99.6337
cchapple-custom	SNP	tv	func_cds	het	99.2733	99.8495	98.7037	37.1216	2653	4	2665	35	0	0.0000
hfeng-pmm3	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.0710	92.4735	99.9597	37.1168	2445	199	2481	1	1	100.0000
jmaeng-gatk	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.3401	86.1140	99.5366	37.1153	3293	531	3437	16	16	100.0000
hfeng-pmm3	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9456	99.9637	99.9275	37.1096	2757	1	2757	2	2	100.0000

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