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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1100 1101 1102 1103 1104 1105 1106 1107 1108 ... 1720 1721 » 55151-55200 / 86044 show all
mlin-fermikit	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	95.8406	96.8379	94.8635	56.7607	5880	192	5873	318	299	94.0252
ltrigg-rtg1	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	97.6327	95.7867	99.5512	56.7594	2569	113	2662	12	12	100.0000
gduggal-snapplat	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	59.8233	47.0725	82.0483	56.7574	1013	1139	1394	305	138	45.2459
raldana-dualsentieon	INDEL	I1_5	HG002complexvar	het	99.3867	98.9004	99.8777	56.7573	17989	200	17970	22	13	59.0909
anovak-vg	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	21.8978	16.8539	31.2500	56.7568	15	74	15	33	19	57.5758
asubramanian-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	56.7568	12	0	16	0	0
hfeng-pmm1	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	56.7568	12	0	16	0	0
hfeng-pmm3	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	56.7568	12	0	16	0	0
jli-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	56.7568	12	0	16	0	0
ckim-isaac	SNP	ti	map_l100_m2_e0	homalt	75.4234	60.5604	99.9549	56.7558	11088	7221	11088	5	5	100.0000
hfeng-pmm3	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5197	99.6701	99.3697	56.7552	3626	12	3626	23	21	91.3043
jli-custom	INDEL	D1_5	*	het	99.7840	99.7088	99.8593	56.7542	87319	255	87313	123	65	52.8455
gduggal-snapfb	INDEL	D1_5	*	het	96.7358	97.4935	95.9898	56.7536	85379	2195	91342	3816	775	20.3092
ciseli-custom	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	*	73.3978	74.0332	72.7731	56.7536	14703	5157	14714	5505	3111	56.5123
ltrigg-rtg2	SNP	tv	map_l100_m2_e1	*	99.1807	98.6394	99.7280	56.7507	24939	344	24934	68	5	7.3529
gduggal-bwaplat	SNP	ti	map_siren	homalt	87.4388	77.6954	99.9762	56.7476	29459	8457	29428	7	6	85.7143
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	97.0530	95.3668	98.8000	56.7474	247	12	247	3	2	66.6667
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.8231	99.8474	99.7988	56.7435	3925	6	3969	8	2	25.0000
gduggal-bwafb	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	93.1550	88.6524	98.1395	56.7404	6039	773	844	16	16	100.0000
hfeng-pmm1	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.9381	99.9059	99.9703	56.7400	20180	19	20180	6	6	100.0000
gduggal-bwafb	SNP	tv	map_siren	homalt	99.6686	99.4490	99.8893	56.7363	17145	95	17145	19	11	57.8947
hfeng-pmm3	SNP	tv	map_siren	*	99.7604	99.7104	99.8104	56.7354	45797	133	45789	87	15	17.2414
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	91.7822	88.7139	95.0704	56.7337	676	86	675	35	23	65.7143
jpowers-varprowl	SNP	ti	tech_badpromoters	het	94.3820	95.4545	93.3333	56.7308	42	2	42	3	0	0.0000
eyeh-varpipe	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.7927	99.7427	99.8427	56.7264	3877	10	3809	6	3	50.0000
hfeng-pmm3	INDEL	D6_15	HG002complexvar	*	97.0065	94.7378	99.3864	56.7243	5023	279	5021	31	24	77.4194
ltrigg-rtg1	INDEL	*	HG002compoundhet	hetalt	95.2514	91.2113	99.6659	56.7239	22967	2213	22971	77	76	98.7013
hfeng-pmm1	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.6018	99.6976	99.5062	56.7205	3627	11	3627	18	18	100.0000
ckim-isaac	SNP	ti	map_l100_m2_e1	homalt	75.4653	60.6143	99.9554	56.7172	11210	7284	11210	5	5	100.0000
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	77.2155	68.0091	89.3048	56.7130	2398	1128	668	80	79	98.7500
gduggal-bwafb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	77.2155	68.0091	89.3048	56.7130	2398	1128	668	80	79	98.7500
mlin-fermikit	INDEL	I6_15	HG002complexvar	homalt	91.3948	92.8336	90.0000	56.7129	1127	87	1152	128	127	99.2188
hfeng-pmm3	INDEL	D1_5	*	*	99.5137	99.1441	99.8861	56.7122	145489	1256	145542	166	109	65.6627
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	hetalt	51.2669	34.7444	97.7528	56.7121	435	817	435	10	10	100.0000
asubramanian-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	88.7848	98.4043	80.8786	56.7114	185	3	313	74	73	98.6486
gduggal-snapvard	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	27.3019	16.0247	92.1569	56.7063	104	545	235	20	18	90.0000
jpowers-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	64.5916	75.6355	56.3620	56.7025	1220	393	1227	950	942	99.1579
ckim-dragen	INDEL	D6_15	func_cds	*	98.8235	97.6744	100.0000	56.7010	42	1	42	0	0
gduggal-snapfb	SNP	ti	tech_badpromoters	homalt	98.7952	100.0000	97.6190	56.7010	41	0	41	1	0	0.0000
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	94.3820	89.3617	100.0000	56.7010	42	5	42	0	0
asubramanian-gatk	INDEL	D6_15	func_cds	*	98.8235	97.6744	100.0000	56.7010	42	1	42	0	0
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	83.4557	90.3376	77.5481	56.6986	2141	229	2138	619	618	99.8384
egarrison-hhga	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.5363	99.2878	99.7860	56.6980	16312	117	16318	35	21	60.0000
raldana-dualsentieon	SNP	*	map_siren	het	99.3673	99.4219	99.3127	56.6962	90465	526	90451	626	10	1.5974
dgrover-gatk	SNP	*	map_siren	*	99.6607	99.6410	99.6805	56.6949	145703	525	145680	467	103	22.0557
gduggal-bwafb	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	*	63.6988	47.5728	96.3636	56.6929	98	108	53	2	1	50.0000
egarrison-hhga	INDEL	D6_15	*	het	92.3399	97.9037	87.3745	56.6927	11349	243	11924	1723	1642	95.2989
mlin-fermikit	SNP	ti	map_l125_m1_e0	*	63.1485	49.0745	88.5410	56.6927	14396	14939	14395	1863	1654	88.7815
raldana-dualsentieon	INDEL	I6_15	HG002complexvar	*	97.4043	95.9098	98.9460	56.6890	4596	196	4600	49	48	97.9592
mlin-fermikit	INDEL	D16_PLUS	HG002compoundhet	homalt	7.6994	87.5000	4.0268	56.6860	7	1	6	143	142	99.3007

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