PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 81 82 83 84 85 86 87 88 89 ... 1720 1721 » 4201-4250 / 86044 show all
jpowers-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	0.6849	0.0000	0.0000	4	580	0	0	0
jpowers-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	97	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l100_m0_e0	hetalt		0.0000	0.0000	0.0000	0	19	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l100_m1_e0	hetalt	0.0000	1.4706	0.0000	0.0000	1	67	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l100_m2_e0	hetalt	0.0000	1.4706	0.0000	0.0000	1	67	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l100_m2_e1	hetalt	0.0000	1.3699	0.0000	0.0000	1	72	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	6	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	19	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	19	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	20	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	5	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	8	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	8	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	9	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
jpowers-varprowl	INDEL	D6_15	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
jpowers-varprowl	INDEL	D6_15	map_siren	hetalt	0.0000	1.0101	0.0000	0.0000	1	98	0	0	0
jpowers-varprowl	INDEL	D6_15	segdup	hetalt	0.0000	2.0408	0.0000	0.0000	1	48	0	0	0
jpowers-varprowl	INDEL	D6_15	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	D6_15	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	INDEL	I16_PLUS	*	hetalt	0.0000	0.3337	0.0000	0.0000	7	2091	0	0	0
jpowers-varprowl	INDEL	I16_PLUS	HG002complexvar	hetalt	0.0000	0.8955	0.0000	0.0000	3	332	0	0	0
jpowers-varprowl	INDEL	I16_PLUS	HG002compoundhet	hetalt	0.0000	0.3344	0.0000	0.0000	7	2086	0	0	0
jpowers-varprowl	INDEL	I16_PLUS	decoy	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I16_PLUS	func_cds	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	1.1628	0.0000	0.0000	1	85	0	0	0
ltrigg-rtg1	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	0.0000	100.0000	0.0000	0	0	1	0	0
ltrigg-rtg1	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	*	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	0.0000	100.0000	0.0000	0	0	1	0	0
ltrigg-rtg1	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	ti	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	tv	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	0.0000	100.0000	0.0000	0	0	1	0	0
ltrigg-rtg1	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	tv	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ltrigg-rtg1	SNP	tv	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge