PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
4151-4200 / 86044 show all
jpowers-varprowlINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
049000
jpowers-varprowlINDELD1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
014000
jpowers-varprowlINDELD1_5map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
047000
jpowers-varprowlINDELD1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
048000
jpowers-varprowlINDELD1_5map_l100_m2_e1hetalt
0.0000
1.9608
0.0000
0.0000
150000
jpowers-varprowlINDELD1_5map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
013000
jpowers-varprowlINDELD1_5map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlINDELD1_5map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlINDELD1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
07000
jpowers-varprowlINDELD1_5map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
07000
jpowers-varprowlINDELD1_5map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlINDELD1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD1_5map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD1_5map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD1_5map_sirenhetalt
0.0000
0.0000
0.0000
084000
jpowers-varprowlINDELD1_5segduphetalt
0.0000
1.9231
0.0000
0.0000
151000
jpowers-varprowlINDELD1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15*hetalt
0.0000
0.3793
0.0000
0.0000
318143000
jpowers-varprowlINDELD6_15HG002complexvarhetalt
0.0000
1.5795
0.0000
0.0000
16997000
jpowers-varprowlINDELD6_15HG002compoundhethetalt
0.0000
0.3803
0.0000
0.0000
318120000
jpowers-varprowlINDELD6_15decoyhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD6_15func_cdshetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.2959
0.0000
0.0000
72359000
jpowers-varprowlINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.4110
0.0000
0.0000
286784000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.3847
0.0000
0.0000
318028000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
039000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
1.8182
0.0000
0.0000
154000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
3.0303
0.0000
0.0000
132000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.2342
0.0000
0.0000
41704000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.3515
0.0000
0.0000
257087000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.3862
0.0000
0.0000
215417000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.3485
0.0000
0.0000
257149000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.3847
0.0000
0.0000
318028000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.3772
0.0000
0.0000
184754000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
0872000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
037000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.5922
0.0000
0.0000
71175000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.7566
0.0000
0.0000
6787000