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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 759 760 761 762 763 764 765 766 767 ... 1720 1721 » 38101-38150 / 86044 show all
gduggal-bwafb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	97.0762	99.4760	94.7894	67.5394	1329	7	1328	73	4	5.4795
eyeh-varpipe	INDEL	D16_PLUS	*	hetalt	28.3581	16.7098	93.6210	67.5396	323	1610	499	34	33	97.0588
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	95.3539	94.1988	96.5376	67.5442	4709	290	4963	178	155	87.0787
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	95.3539	94.1988	96.5376	67.5442	4709	290	4963	178	155	87.0787
gduggal-bwaplat	INDEL	*	*	het	92.4727	86.8430	98.8829	67.5454	168591	25542	168540	1904	839	44.0651
eyeh-varpipe	SNP	ti	map_l125_m1_e0	hetalt	100.0000	100.0000	100.0000	67.5456	24	0	160	0	0
ndellapenna-hhga	SNP	*	map_l125_m1_e0	*	99.1686	98.5527	99.7922	67.5463	44671	656	44671	93	49	52.6882
jmaeng-gatk	SNP	*	map_l100_m2_e1	homalt	84.2134	72.7551	99.9555	67.5514	20223	7573	20223	9	8	88.8889
hfeng-pmm1	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	*	98.3717	96.7955	100.0000	67.5515	4682	155	4682	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	93.7733	90.0718	97.7922	67.5516	753	83	753	17	15	88.2353
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.3188	98.0964	98.5422	67.5554	64107	1244	63878	945	830	87.8307
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.3188	98.0964	98.5422	67.5554	64107	1244	63878	945	830	87.8307
raldana-dualsentieon	SNP	ti	map_l100_m2_e1	het	99.0592	99.1473	98.9712	67.5574	30696	264	30689	319	6	1.8809
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	89.1830	82.6962	96.7742	67.5635	411	86	420	14	13	92.8571
jpowers-varprowl	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	77.3118	66.0300	93.2432	67.5642	484	249	483	35	30	85.7143
astatham-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.4067	97.3876	99.4474	67.5648	15657	420	15658	87	73	83.9080
astatham-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.4067	97.3876	99.4474	67.5648	15657	420	15658	87	73	83.9080
jli-custom	SNP	ti	map_l125_m1_e0	hetalt	100.0000	100.0000	100.0000	67.5676	24	0	24	0	0
ltrigg-rtg1	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	*	96.0000	92.3077	100.0000	67.5676	12	1	12	0	0
gduggal-snapfb	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	69.4006	59.4595	83.3333	67.5676	22	15	10	2	2	100.0000
gduggal-snapplat	INDEL	*	HG002compoundhet	homalt	27.3298	63.4111	17.4185	67.5742	435	251	668	3167	2730	86.2015
gduggal-bwaplat	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	het	91.6939	85.0833	99.4182	67.5827	5972	1047	5981	35	13	37.1429
jpowers-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	77.9866	84.1808	72.6415	67.5841	149	28	154	58	58	100.0000
hfeng-pmm2	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	97.8166	97.1098	98.5337	67.5856	336	10	336	5	0	0.0000
dgrover-gatk	SNP	ti	map_l100_m2_e1	*	99.5279	99.4766	99.5792	67.5880	49226	259	49219	208	50	24.0385
ndellapenna-hhga	INDEL	D16_PLUS	*	het	92.2712	93.4473	91.1244	67.5886	2952	207	3193	311	263	84.5659
dgrover-gatk	SNP	ti	map_l100_m2_e0	*	99.5249	99.4730	99.5767	67.5957	48703	258	48696	207	50	24.1546
hfeng-pmm3	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	96.5955	95.4157	97.8049	67.5959	5578	268	5525	124	115	92.7419
hfeng-pmm3	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	96.5955	95.4157	97.8049	67.5959	5578	268	5525	124	115	92.7419
hfeng-pmm3	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.0356	98.2979	99.7845	67.5978	462	8	463	1	1	100.0000
ltrigg-rtg2	SNP	tv	map_l150_m1_e0	homalt	99.7842	99.6199	99.9492	67.6001	3931	15	3932	2	1	50.0000
ltrigg-rtg2	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.4525	98.8280	98.0798	67.6014	30778	365	31005	607	33	5.4366
ltrigg-rtg2	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.4525	98.8280	98.0798	67.6014	30778	365	31005	607	33	5.4366
rpoplin-dv42	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	98.0971	98.0315	98.1627	67.6020	747	15	748	14	7	50.0000
asubramanian-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	97.8022	98.1618	97.4453	67.6027	1068	20	1068	28	24	85.7143
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.7709	99.7523	97.8086	67.6045	18121	45	18121	406	388	95.5665
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.7709	99.7523	97.8086	67.6045	18121	45	18121	406	388	95.5665
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	*	99.7162	99.7111	99.7214	67.6049	9664	28	9664	27	20	74.0741
astatham-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	95.1899	100.0000	90.8213	67.6056	188	0	188	19	18	94.7368
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	96.1365	93.1900	99.2754	67.6056	260	19	274	2	2	100.0000
qzeng-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	78.5716	74.3137	83.3471	67.6060	1137	393	2012	402	245	60.9453
qzeng-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	78.5716	74.3137	83.3471	67.6060	1137	393	2012	402	245	60.9453
ghariani-varprowl	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	95.4136	99.0024	92.0759	67.6063	55076	555	55287	4758	565	11.8747
gduggal-bwafb	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	het	92.4658	89.4891	95.6473	67.6067	1524	179	1692	77	41	53.2468
hfeng-pmm3	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.3763	98.7603	100.0000	67.6113	239	3	240	0	0
raldana-dualsentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	67.6126	525	0	525	0	0
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8092	99.6190	100.0000	67.6161	523	2	523	0	0
ckim-dragen	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8974	100.0000	99.7951	67.6178	487	0	487	1	0	0.0000
rpoplin-dv42	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	98.8202	98.3099	99.3359	67.6190	1047	18	1047	7	5	71.4286
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	99.4591	99.4895	99.4288	67.6195	30984	159	30984	178	19	10.6742

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