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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
20601-20650 / 86044 show all
bgallagher-sentieonSNPtifunc_cds*
99.9094
99.9565
99.8623
22.5049
13781613779190
0.0000
qzeng-customSNP***
99.4966
99.2413
99.7533
22.5407
303145823176301298374521530
20.5314
ckim-gatkSNPtvHG002complexvar*
99.5164
99.0689
99.9680
22.5419
24386022922437687828
35.8974
ltrigg-rtg1SNPtvHG002complexvarhomalt
99.9101
99.8465
99.9737
22.5425
94965146950032519
76.0000
ckim-isaacINDELD6_15HG002compoundhet*
87.3304
83.8888
91.0664
22.5432
757614557472733687
93.7244
anovak-vgSNPtvHG002complexvarhet
97.4369
96.9012
97.9786
22.5474
146063467114434729782196
73.7408
hfeng-pmm1SNPtiHG002compoundhethetalt
99.8270
99.6546
100.0000
22.5503
577257700
ckim-dragenSNPtvHG002complexvar*
99.9267
99.9175
99.9359
22.5633
24594920324620015880
50.6329
astatham-gatkSNPtifunc_cds*
99.8730
99.7897
99.9564
22.5679
13758291375660
0.0000
raldana-dualsentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.7987
95.6923
100.0000
22.5767
6222863100
ghariani-varprowlSNPti**
99.5372
99.8784
99.1982
22.5770
208295725362083186168371291
7.6676
gduggal-snapfbSNPtifunc_cdshomalt
99.9716
99.9810
99.9621
22.5825
52741527421
50.0000
jmaeng-gatkSNPtvHG002complexvar*
99.5035
99.0473
99.9639
22.5835
24380723452437158831
35.2273
asubramanian-gatkSNPtvHG002complexvar*
98.0754
96.2442
99.9776
22.6117
23690792452368245318
33.9623
anovak-vgSNPtvHG002complexvar*
97.7258
97.1262
98.3329
22.6263
239081707423558939942964
74.2113
jlack-gatkSNPtvHG002complexvarhomalt
99.9385
99.8959
99.9811
22.6324
9501299949941814
77.7778
hfeng-pmm2SNPtifunc_cds*
99.9166
99.9710
99.8623
22.6414
13783413781190
0.0000
gduggal-snapplatSNPtv*homalt
99.0993
98.3541
99.8560
22.6563
3709166207370887535142
26.5421
gduggal-bwavardINDELI1_5func_cdshomalt
97.4138
94.9580
100.0000
22.6950
113610900
gduggal-snapfbSNPti*het
99.2278
99.8088
98.6535
22.6951
12794462451127998017470996
5.7012
ltrigg-rtg2SNP*func_cdshet
99.5132
99.8298
99.1986
22.7101
111421911141901
1.1111
mlin-fermikitSNPtvfunc_cds*
99.2667
99.1078
99.4262
22.7208
43323943322514
56.0000
ckim-vqsrSNPtiHG002compoundhethetalt
97.5221
95.1641
100.0000
22.7209
5512855100
ndellapenna-hhgaSNPtifunc_cdshet
99.9118
99.9530
99.8708
22.7256
850048500110
0.0000
eyeh-varpipeINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
17.6471
22.7273
0031414
100.0000
jli-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
97.8720
95.8799
99.9486
22.7273
3863166389122
100.0000
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
98.0000
96.0784
100.0000
22.7273
4925100
hfeng-pmm3SNPtifunc_cdshet
99.9001
99.9530
99.8473
22.7326
850048498130
0.0000
egarrison-hhgaSNPtvHG002complexvarhomalt
99.8748
99.8086
99.9410
22.7459
94929182949385646
82.1429
gduggal-bwaplatSNPtvHG002compoundhethetalt
96.3319
92.9234
100.0000
22.7493
8016179800
gduggal-bwaplatSNP*HG002compoundhethetalt
96.3319
92.9234
100.0000
22.7493
8016179800
dgrover-gatkSNP*HG002compoundhethetalt
99.8257
99.6520
100.0000
22.7518
859385900
dgrover-gatkSNPtvHG002compoundhethetalt
99.8257
99.6520
100.0000
22.7518
859385900
anovak-vgSNPtvHG002complexvarhomalt
98.3199
97.7479
98.8987
22.7520
929692142912421016768
75.5906
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
97.3292
95.2834
99.4647
22.7525
650532265043534
97.1429
hfeng-pmm2SNPtiHG002compoundhethetalt
99.8270
99.6546
100.0000
22.7577
577257700
jpowers-varprowlSNPti*het
99.4145
99.3343
99.4948
22.7953
1273353853412735116466293
4.5314
bgallagher-sentieonSNPtvHG002complexvarhomalt
99.9663
99.9453
99.9874
22.7972
9505952950441210
83.3333
dgrover-gatkSNPtvHG002complexvarhomalt
99.9637
99.9411
99.9863
22.7977
9505556950401311
84.6154
astatham-gatkSNPtvHG002complexvarhomalt
99.9458
99.9043
99.9874
22.8056
9502091950051210
83.3333
raldana-dualsentieonSNPtvHG002complexvarhomalt
99.9758
99.9632
99.9884
22.8157
950763595070119
81.8182
ltrigg-rtg1SNP*func_cds*
99.6647
99.8898
99.4405
22.8252
1813020181291021
0.9804
ckim-dragenSNPti*het
99.7466
99.9566
99.5375
22.8315
128133555612814945955318
5.3401
rpoplin-dv42SNPtvHG002complexvarhomalt
99.9385
99.9201
99.9569
22.8530
9503576950114137
90.2439
jli-customSNPtvHG002complexvarhomalt
99.9542
99.9254
99.9832
22.8543
9504071950291611
68.7500
ckim-vqsrSNPtvHG002complexvar*
98.6339
97.3216
99.9820
22.8566
23955965932394684320
46.5116
dgrover-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
22.8571
5105400
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
22.8571
5105400
ckim-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
22.8571
5105400
jli-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
22.8571
5105400