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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 405 406 407 408 409 410 411 412 413 ... 1720 1721 » 20401-20450 / 86044 show all
rpoplin-dv42	INDEL	D6_15	HG002compoundhet	hetalt	96.0843	92.8720	99.5267	21.0341	7570	581	7570	36	35	97.2222
gduggal-snapvard	SNP	*	HG002complexvar	*	97.8941	96.7741	99.0404	21.0357	730048	24336	708362	6863	2537	36.9663
jli-custom	SNP	*	func_cds	homalt	99.9785	99.9570	100.0000	21.0413	6976	3	6976	0	0
mlin-fermikit	INDEL	D1_5	func_cds	homalt	99.3289	100.0000	98.6667	21.0526	74	0	74	1	1	100.0000
ckim-dragen	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	95.7447	91.8367	100.0000	21.0526	45	4	45	0	0
ciseli-custom	SNP	ti	*	het	97.9524	98.4710	97.4391	21.0644	1262297	19600	1259858	33111	542	1.6369
asubramanian-gatk	SNP	ti	*	het	99.0688	98.2225	99.9298	21.0842	1259105	22786	1259055	884	67	7.5792
ckim-isaac	SNP	tv	func_cds	homalt	99.0820	98.1808	100.0000	21.0849	1673	31	1673	0	0
hfeng-pmm3	SNP	tv	*	*	99.9443	99.9171	99.9715	21.1004	968886	804	968804	276	31	11.2319
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	93.0591	87.6396	99.1931	21.1150	3531	498	3565	29	24	82.7586
ckim-isaac	INDEL	I6_15	HG002compoundhet	hetalt	82.1207	69.9426	99.4336	21.1377	5971	2566	5969	34	23	67.6471
jpowers-varprowl	SNP	ti	*	*	99.5767	99.5483	99.6052	21.1558	2076086	9421	2076295	8230	1307	15.8809
ltrigg-rtg1	SNP	tv	HG002complexvar	het	99.7971	99.6716	99.9230	21.1569	150239	495	150457	116	36	31.0345
ndellapenna-hhga	SNP	tv	HG002complexvar	het	99.7024	99.4520	99.9540	21.1664	149905	826	149923	69	30	43.4783
jli-custom	SNP	tv	*	*	99.9049	99.9528	99.8570	21.1774	969232	458	969166	1388	83	5.9798
ltrigg-rtg2	SNP	ti	func_cds	het	99.6069	99.8354	99.3795	21.1847	8490	14	8489	53	1	1.8868
ltrigg-rtg2	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	97.8947	95.8763	100.0000	21.1864	93	4	93	0	0
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	97.8947	95.8763	100.0000	21.1864	93	4	93	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	97.8947	95.8763	100.0000	21.1864	93	4	93	0	0
jli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	97.8947	95.8763	100.0000	21.1864	93	4	93	0	0
ltrigg-rtg2	SNP	tv	HG002complexvar	het	99.8062	99.7174	99.8951	21.1944	150308	426	150523	158	48	30.3797
egarrison-hhga	SNP	tv	HG002complexvar	het	99.7360	99.5170	99.9560	21.2359	150003	728	150023	66	28	42.4242
gduggal-snapplat	SNP	*	HG002complexvar	homalt	98.9173	98.0729	99.7763	21.2516	283014	5561	282787	634	338	53.3123
ciseli-custom	SNP	*	HG002complexvar	homalt	96.2605	98.9760	93.6900	21.2638	285620	2955	278961	18788	7728	41.1326
cchapple-custom	INDEL	D1_5	func_cds	homalt	100.0000	100.0000	100.0000	21.2766	74	0	74	0	0
qzeng-custom	INDEL	D1_5	func_cds	homalt	100.0000	100.0000	100.0000	21.2766	74	0	74	0	0
raldana-dualsentieon	SNP	tv	*	*	99.9049	99.8971	99.9127	21.2799	968692	998	968612	846	44	5.2010
cchapple-custom	SNP	tv	HG002complexvar	*	99.7805	99.6506	99.9108	21.2813	245292	860	244113	218	153	70.1835
rpoplin-dv42	SNP	tv	HG002complexvar	het	99.8928	99.8249	99.9608	21.2882	150467	264	150382	59	46	77.9661
gduggal-snapfb	SNP	*	HG002complexvar	homalt	99.5552	99.6857	99.4250	21.2913	287668	907	287733	1664	399	23.9784
ghariani-varprowl	SNP	ti	func_cds	homalt	99.8769	99.9431	99.8107	21.2934	5272	3	5272	10	7	70.0000
ltrigg-rtg1	SNP	*	HG002compoundhet	hetalt	99.8257	99.6520	100.0000	21.3175	859	3	860	0	0
ltrigg-rtg1	SNP	tv	HG002compoundhet	hetalt	99.8257	99.6520	100.0000	21.3175	859	3	860	0	0
hfeng-pmm3	SNP	tv	*	het	99.9161	99.8738	99.9586	21.3235	590949	747	590875	245	12	4.8980
ckim-isaac	SNP	*	func_cds	het	99.4778	98.9965	99.9638	21.3254	11049	112	11049	4	0	0.0000
ckim-isaac	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	homalt	98.0365	96.2158	99.9273	21.3265	1373	54	1375	1	0	0.0000
ltrigg-rtg1	SNP	ti	func_cds	*	99.7465	99.8912	99.6022	21.3270	13772	15	13771	55	1	1.8182
ltrigg-rtg1	INDEL	I1_5	func_cds	het	100.0000	100.0000	100.0000	21.3333	59	0	59	0	0
anovak-vg	SNP	*	*	*	98.4545	98.3357	98.5736	21.3437	3003796	50838	2987348	43227	18700	43.2600
jlack-gatk	SNP	*	func_cds	homalt	99.9713	99.9427	100.0000	21.3464	6975	4	6975	0	0
jli-custom	SNP	tv	HG002complexvar	het	99.9074	99.8560	99.9588	21.3761	150514	217	150454	62	22	35.4839
gduggal-snapfb	SNP	ti	*	*	99.4335	99.8078	99.0620	21.3991	2081510	4008	2082093	19715	1288	6.5331
gduggal-bwaplat	SNP	*	HG002complexvar	*	97.7797	96.6309	98.9561	21.4247	728965	25416	729516	7696	1060	13.7734
ciseli-custom	INDEL	I6_15	func_cds	homalt	61.5385	53.3333	72.7273	21.4286	8	7	8	3	3	100.0000
gduggal-snapfb	SNP	*	*	homalt	99.6988	99.7992	99.5986	21.4529	1177792	2370	1177860	4747	451	9.5007
gduggal-bwavard	SNP	ti	*	*	99.3434	99.0343	99.6545	21.4644	2065379	20139	2057255	7133	2188	30.6743
rpoplin-dv42	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	21.4775	5272	3	5272	0	0
bgallagher-sentieon	SNP	tv	HG002complexvar	het	99.9389	99.9237	99.9542	21.4883	150616	115	150540	69	21	30.4348
asubramanian-gatk	SNP	*	func_cds	homalt	99.7270	99.4555	100.0000	21.4908	6941	38	6941	0	0
ltrigg-rtg2	SNP	ti	HG002compoundhet	hetalt	99.7403	99.4819	100.0000	21.4966	576	3	577	0	0

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