PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
17001-17050 / 86044 show all
gduggal-snapvardINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
66.9535
0.0000
0.0000
62243072000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
60.0151
0.0000
0.0000
55763715000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
56.5217
0.0000
0.0000
3930000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
58.1081
0.0000
0.0000
4331000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
54.0541
0.0000
0.0000
2017000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
31.0612
0.0000
0.0000
401890000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
60.7906
0.0000
0.0000
49213174000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
66.2224
0.0000
0.0000
45212306000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
60.7121
0.0000
0.0000
49623211000
gduggal-snapvardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
60.0151
0.0000
0.0000
55763715000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
66.8748
0.0000
0.0000
46052281000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
19.3483
0.0000
0.0000
95396000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
92.9440
0.0000
0.0000
38229000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
62.1567
0.0000
0.0000
928565000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
26.6154
0.0000
0.0000
173477000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
76.6234
0.0000
0.0000
354108000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
38.7755
0.0000
0.0000
1930000
gduggal-snapvardINDELD1_5map_l100_m0_e0hetalt
0.0000
78.5714
0.0000
0.0000
113000
gduggal-snapvardINDELD1_5map_l100_m1_e0hetalt
0.0000
53.1915
0.0000
0.0000
2522000
gduggal-snapvardINDELD1_5map_l100_m2_e0hetalt
0.0000
52.0833
0.0000
0.0000
2523000
gduggal-snapvardINDELD1_5map_l100_m2_e1hetalt
0.0000
49.0196
0.0000
0.0000
2526000
gduggal-snapvardINDELD1_5map_l125_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
gduggal-snapvardINDELD1_5map_l125_m1_e0hetalt
0.0000
69.2308
0.0000
0.0000
94000
gduggal-snapvardINDELD1_5map_l125_m2_e0hetalt
0.0000
66.6667
0.0000
0.0000
105000
gduggal-snapvardINDELD1_5map_l125_m2_e1hetalt
0.0000
66.6667
0.0000
0.0000
105000
gduggal-snapvardINDELD1_5map_l150_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
gduggal-snapvardINDELD1_5map_l150_m1_e0hetalt
0.0000
71.4286
0.0000
0.0000
52000
gduggal-snapvardINDELD1_5map_l150_m2_e0hetalt
0.0000
71.4286
0.0000
0.0000
52000
gduggal-snapvardINDELD1_5map_l150_m2_e1hetalt
0.0000
75.0000
0.0000
0.0000
62000
gduggal-snapvardINDELD1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD1_5map_l250_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
gduggal-snapvardINDELD1_5map_l250_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
gduggal-snapvardINDELD1_5map_l250_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
30000
gduggal-snapvardINDELD1_5map_sirenhetalt
0.0000
47.6190
0.0000
0.0000
4044000
gduggal-snapvardINDELD1_5segduphetalt
0.0000
71.1538
0.0000
0.0000
3715000
gduggal-snapvardINDELD1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD1_5tech_badpromotershetalt
0.0000
50.0000
0.0000
0.0000
11000
gduggal-snapvardINDELD6_15*hetalt
0.0000
50.2569
0.0000
0.0000
41084066000
gduggal-snapvardINDELD6_15HG002complexvarhetalt
0.0000
48.8648
0.0000
0.0000
495518000
gduggal-snapvardINDELD6_15HG002compoundhethetalt
0.0000
50.3006
0.0000
0.0000
41004051000
gduggal-snapvardINDELD6_15decoyhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardINDELD6_15func_cdshetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
23.3728
0.0000
0.0000
5531813000