PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
15801-15850 / 86044 show all
cchapple-customSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
92.3077
0.0000
0.0000
121000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
100.0000
0.0000
0.0000
150000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
100.0000
0.0000
0.0000
150000
cchapple-customSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
0.0000
0.0000
50000
cchapple-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
50000
cchapple-customSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
cchapple-customSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*map_l100_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
160000
cchapple-customSNP*map_l100_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
410000
cchapple-customSNP*map_l100_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
420000
cchapple-customSNP*map_l100_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
430000
cchapple-customSNP*map_l125_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
90000
cchapple-customSNP*map_l125_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
300000
cchapple-customSNP*map_l125_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
300000
cchapple-customSNP*map_l125_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
300000
cchapple-customSNP*map_l150_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customSNP*map_l150_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
200000
cchapple-customSNP*map_l150_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
200000
cchapple-customSNP*map_l150_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
200000
cchapple-customSNP*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*map_l250_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
40000
cchapple-customSNP*map_l250_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
50000
cchapple-customSNP*map_l250_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
50000
cchapple-customSNP*map_sirenhetalt
0.0000
98.7654
0.0000
0.0000
801000
cchapple-customSNP*segduphetalt
0.0000
100.0000
0.0000
0.0000
70000
cchapple-customSNP*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNPti*hetalt
0.0000
99.4845
0.0000
0.0000
5793000
cchapple-customSNPtiHG002complexvarhetalt
0.0000
98.5507
0.0000
0.0000
2043000
cchapple-customSNPtiHG002compoundhethetalt
0.0000
99.4819
0.0000
0.0000
5763000
cchapple-customSNPtidecoyhetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNPtifunc_cdshetalt
0.0000
100.0000
0.0000
0.0000
80000
cchapple-customSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000