PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
14801-14850 / 86044 show all
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
130000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI16_PLUSmap_l100_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELI16_PLUSmap_l100_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customINDELI16_PLUSmap_l100_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customINDELI16_PLUSmap_l100_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customINDELI16_PLUSmap_l125_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELI16_PLUSmap_l125_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customINDELI16_PLUSmap_l125_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customINDELI16_PLUSmap_l125_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
30000
cchapple-customINDELI16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELI16_PLUSmap_l150_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI16_PLUSmap_l150_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI16_PLUSmap_l150_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI16_PLUSmap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI16_PLUSmap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI16_PLUSmap_l250_m2_e0hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI16_PLUSmap_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI16_PLUSmap_sirenhetalt
0.0000
93.7500
0.0000
0.0000
151000
cchapple-customINDELI16_PLUSsegduphetalt
0.0000
100.0000
0.0000
0.0000
40000
cchapple-customINDELI16_PLUSsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5*hetalt
0.0000
94.3993
0.0000
0.0000
10568627000
cchapple-customINDELI1_5HG002complexvarhetalt
0.0000
92.6419
0.0000
0.0000
1599127000
cchapple-customINDELI1_5HG002compoundhethetalt
0.0000
94.4082
0.0000
0.0000
10552625000
cchapple-customINDELI1_5decoyhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5func_cdshetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
86.1761
0.0000
0.0000
773124000
cchapple-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
95.5035
0.0000
0.0000
5671267000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
94.5047
0.0000
0.0000
5572324000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
86.9048
0.0000
0.0000
7311000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
96.4286
0.0000
0.0000
1084000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
96.6667
0.0000
0.0000
582000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
87.1835
0.0000
0.0000
55181000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
94.1037
0.0000
0.0000
4373274000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
95.1601
0.0000
0.0000
3834195000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
94.0067
0.0000
0.0000
4486286000
cchapple-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
94.5047
0.0000
0.0000
5572324000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
95.4008
0.0000
0.0000
3630175000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
64.2458
0.0000
0.0000
11564000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
94.9367
0.0000
0.0000
30016000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
96.7286
0.0000
0.0000
109437000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
92.1659
0.0000
0.0000
20017000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000