PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 289 290 291 292 293 294 295 296 297 ... 1720 1721 » 14601-14650 / 86044 show all
cchapple-custom	INDEL	C6_15	map_l100_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	map_siren	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	C6_15	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	*	hetalt	0.0000	90.8432	0.0000	0.0000	1756	177	0	0	0
cchapple-custom	INDEL	D16_PLUS	HG002complexvar	hetalt	0.0000	82.1862	0.0000	0.0000	203	44	0	0	0
cchapple-custom	INDEL	D16_PLUS	HG002compoundhet	hetalt	0.0000	90.9751	0.0000	0.0000	1754	174	0	0	0
cchapple-custom	INDEL	D16_PLUS	decoy	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	func_cds	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	86.6667	0.0000	0.0000	845	130	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	93.9722	0.0000	0.0000	1216	78	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	90.8338	0.0000	0.0000	1754	177	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	0.0000	72.7273	0.0000	0.0000	8	3	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	89.4737	0.0000	0.0000	17	2	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	0.0000	83.3333	0.0000	0.0000	10	2	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	0.0000	86.0832	0.0000	0.0000	600	97	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	91.4038	0.0000	0.0000	1478	139	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	94.9153	0.0000	0.0000	896	48	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	91.0855	0.0000	0.0000	1502	147	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	90.8338	0.0000	0.0000	1754	177	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	94.5153	0.0000	0.0000	741	43	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	81.7768	0.0000	0.0000	359	80	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	0.0000	91.6667	0.0000	0.0000	11	1	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	0.0000	88.8889	0.0000	0.0000	8	1	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	0.0000	93.5976	0.0000	0.0000	307	21	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	89.7143	0.0000	0.0000	314	36	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	92.1569	0.0000	0.0000	47	4	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge