PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 185 186 187 188 189 190 191 192 193 ... 1720 1721 » 9401-9450 / 86044 show all
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D6_15	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	2	0	0
ckim-isaac	INDEL	I16_PLUS	func_cds	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I16_PLUS	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
ckim-isaac	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	*	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
ckim-isaac	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	*	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-isaac	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
ckim-isaac	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge