PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
79951-80000 / 86044 show all
egarrison-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvsegdupwithalt*
0.0000
100.0000
00000
egarrison-hhgaSNPtvsegdupwithalthet
0.0000
100.0000
00000
egarrison-hhgaSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
egarrison-hhgaSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
eyeh-varpipeINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
eyeh-varpipeINDEL*segdupwithalthomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSdecoy*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSdecoyhet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSdecoyhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSdecoyhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSfunc_cds*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSfunc_cdshet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSfunc_cdshomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
00000