PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
74601-74650 / 86044 show all
astatham-gatkINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9120
10100
dgrover-gatkINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9120
10100
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
100.0000
99.9127
00400
hfeng-pmm3INDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
87.3170
80.6452
95.1923
99.9131
100249950
0.0000
rpoplin-dv42INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
66.6667
50.0000
100.0000
99.9132
11100
jpowers-varprowlINDELD6_15decoyhet
0.0000
0.0000
99.9142
00011
100.0000
raldana-dualsentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10het
82.4324
70.1149
100.0000
99.9146
61266000
anovak-vgINDELD6_15decoy*
0.0000
0.0000
99.9147
01010
0.0000
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9149
10100
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
84.0909
99.9156
003777
100.0000
mlin-fermikitINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
69.4864
63.7097
76.4151
99.9162
7945812524
96.0000
gduggal-bwafbINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9165
10100
jpowers-varprowlINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9173
30300
rpoplin-dv42INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9174
10100
astatham-gatkINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
94.7563
95.1613
94.3548
99.9176
118611770
0.0000
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
88.4082
79.8387
99.0385
99.9179
992510311
100.0000
hfeng-pmm1INDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
90.2655
82.2581
100.0000
99.9182
1022210100
ltrigg-rtg2INDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
88.9077
80.6452
99.0566
99.9183
1002410511
100.0000
ckim-gatkINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
95.9513
95.9677
95.9350
99.9185
119511850
0.0000
gduggal-bwavardINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
100.0000
99.9189
00200
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
95.4968
94.3548
96.6667
99.9192
117711640
0.0000
eyeh-varpipeSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
25.0000
99.9194
00130
0.0000
ghariani-varprowlINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9196
30300
raldana-dualsentieonINDEL*decoy*
100.0000
100.0000
100.0000
99.9200
1001000
ltrigg-rtg1INDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9201
30300
ckim-vqsrINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
95.4968
94.3548
96.6667
99.9204
117711640
0.0000
hfeng-pmm2INDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
84.9320
77.4194
94.0594
99.9207
96289560
0.0000
jli-customINDEL*decoy*
100.0000
100.0000
100.0000
99.9207
1001000
ghariani-varprowlINDEL*lowcmp_SimpleRepeat_homopolymer_gt10het
72.3404
78.1609
67.3267
99.9209
6819683318
54.5455
ckim-dragenINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
94.2454
92.7419
95.7983
99.9211
115911453
60.0000
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
83.3333
75.0000
93.7500
99.9211
1241511
100.0000
dgrover-gatkINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
95.1053
94.3548
95.8678
99.9213
117711651
20.0000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
66.4762
60.4839
73.7864
99.9217
7549762719
70.3704
cchapple-customINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9217
10100
hfeng-pmm3INDEL*decoy*
100.0000
100.0000
100.0000
99.9223
1001000
ghariani-varprowlINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
68.4170
67.7419
69.1057
99.9232
8440853822
57.8947
raldana-dualsentieonINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9232
30300
ltrigg-rtg2INDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9232
10100
jli-customINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9239
30300
jpowers-varprowlINDELD6_15decoy*
0.0000
0.0000
99.9240
01011
100.0000
ndellapenna-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9246
10100
jmaeng-gatkINDEL*lowcmp_SimpleRepeat_homopolymer_gt10*
93.7133
90.3226
97.3684
99.9248
1121211130
0.0000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_homopolymer_gt10het
69.8225
67.8161
71.9512
99.9249
5928592315
65.2174
hfeng-pmm3INDELD1_5decoy*
100.0000
100.0000
100.0000
99.9249
40400
cchapple-customINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9250
30300
gduggal-snapplatINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
99.9251
04100
gduggal-bwafbINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9253
30300
hfeng-pmm2INDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9253
30300
hfeng-pmm3INDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9254
30300
gduggal-bwavardINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9255
30200