PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
7201-7250 / 86044 show all
anovak-vgINDELD16_PLUSmap_l250_m2_e0hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_l250_m2_e1hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_sirenhetalt
0.0000
6.4516
0.0000
0.0000
229000
anovak-vgINDELD16_PLUSsegduphetalt
0.0000
0.0000
0.0000
09000
anovak-vgINDELD16_PLUSsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUStech_badpromotershet
40.0000
25.0000
100.0000
0.0000
13100
anovak-vgINDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5*hetalt
0.0000
29.0971
0.0000
0.0000
29817264000
anovak-vgINDELD1_5HG002complexvarhetalt
0.0000
35.5769
0.0000
0.0000
481871000
anovak-vgINDELD1_5HG002compoundhethetalt
0.0000
29.0525
0.0000
0.0000
29687248000
anovak-vgINDELD1_5decoyhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
16.7947
0.0000
0.0000
3061516000
anovak-vgINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
30.4432
0.0000
0.0000
28306466000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
28.3070
0.0000
0.0000
26306661000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
24.6377
0.0000
0.0000
1752000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
35.1351
0.0000
0.0000
2648000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
40.5405
0.0000
0.0000
1522000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
16.8087
0.0000
0.0000
2171074000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
27.6590
0.0000
0.0000
22395856000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
29.6470
0.0000
0.0000
20244803000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
27.7254
0.0000
0.0000
22665907000
anovak-vgINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
28.3070
0.0000
0.0000
26306661000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
29.5818
0.0000
0.0000
20374849000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
6.5173
0.0000
0.0000
32459000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
24.5742
0.0000
0.0000
101310000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
36.0348
0.0000
0.0000
538955000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
18.1538
0.0000
0.0000
118532000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
40.0433
0.0000
0.0000
185277000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
20.4082
0.0000
0.0000
1039000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD1_5map_l100_m0_e0hetalt
0.0000
42.8571
0.0000
0.0000
68000
anovak-vgINDELD1_5map_l100_m1_e0hetalt
0.0000
29.7872
0.0000
0.0000
1433000
anovak-vgINDELD1_5map_l100_m2_e0hetalt
0.0000
31.2500
0.0000
0.0000
1533000
anovak-vgINDELD1_5map_l100_m2_e1hetalt
0.0000
33.3333
0.0000
0.0000
1734000
anovak-vgINDELD1_5map_l125_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
anovak-vgINDELD1_5map_l125_m1_e0hetalt
0.0000
38.4615
0.0000
0.0000
58000
anovak-vgINDELD1_5map_l125_m2_e0hetalt
0.0000
33.3333
0.0000
0.0000
510000
anovak-vgINDELD1_5map_l125_m2_e1hetalt
0.0000
33.3333
0.0000
0.0000
510000
anovak-vgINDELD1_5map_l150_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
anovak-vgINDELD1_5map_l150_m1_e0hetalt
0.0000
42.8571
0.0000
0.0000
34000