PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
7151-7200 / 86044 show all
anovak-vgINDELD16_PLUSHG002compoundhethetalt
0.0000
16.4938
0.0000
0.0000
3181610000
anovak-vgINDELD16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
11.1795
0.0000
0.0000
109866000
anovak-vgINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
20.0155
0.0000
0.0000
2591035000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
16.4164
0.0000
0.0000
3171614000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
18.1818
0.0000
0.0000
29000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
36.8421
0.0000
0.0000
712000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
41.6667
0.0000
0.0000
57000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
11.3343
0.0000
0.0000
79618000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
100.0000
0.0000
00100
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
0.0000
00100
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
16.9450
0.0000
0.0000
2741343000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
20.6568
0.0000
0.0000
195749000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
16.7981
0.0000
0.0000
2771372000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
16.4164
0.0000
0.0000
3171614000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
19.7704
0.0000
0.0000
155629000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
9.1116
0.0000
0.0000
40399000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
8.3333
0.0000
0.0000
111000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
09000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
22.5610
0.0000
0.0000
74254000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
11.4286
0.0000
0.0000
40310000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
25.4902
0.0000
0.0000
1338000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
025000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSmap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
04000
anovak-vgINDELD16_PLUSmap_l100_m1_e0hetalt
0.0000
7.6923
0.0000
0.0000
224000
anovak-vgINDELD16_PLUSmap_l100_m2_e0hetalt
0.0000
7.6923
0.0000
0.0000
224000
anovak-vgINDELD16_PLUSmap_l100_m2_e1hetalt
0.0000
6.6667
0.0000
0.0000
228000
anovak-vgINDELD16_PLUSmap_l125_m0_e0hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
03000
anovak-vgINDELD16_PLUSmap_l125_m2_e0hetalt
0.0000
0.0000
0.0000
03000
anovak-vgINDELD16_PLUSmap_l125_m2_e1hetalt
0.0000
0.0000
0.0000
04000
anovak-vgINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSmap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_l150_m2_e0hetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSmap_l150_m2_e1hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD16_PLUSmap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSmap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
01000