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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1150 1151 1152 1153 1154 1155 1156 1157 1158 ... 1720 1721 » 57651-57700 / 86044 show all
gduggal-bwafb	SNP	tv	map_l250_m2_e0	*	97.4404	97.0854	97.7980	89.7481	2798	84	2798	63	14	22.2222
raldana-dualsentieon	INDEL	D1_5	map_l150_m0_e0	*	97.4141	97.5779	97.2509	89.7535	282	7	283	8	1	12.5000
cchapple-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	89.3162	86.2903	92.5620	89.7544	107	17	112	9	0	0.0000
ltrigg-rtg1	INDEL	D16_PLUS	map_l125_m2_e0	het	89.3268	85.0000	94.1176	89.7590	17	3	16	1	0	0.0000
gduggal-snapvard	INDEL	D1_5	map_l125_m2_e1	het	85.7424	98.1818	76.1006	89.7593	756	14	968	304	95	31.2500
gduggal-snapfb	SNP	ti	map_l250_m2_e1	*	94.5649	94.0898	95.0448	89.7593	4776	300	4776	249	130	52.2088
egarrison-hhga	INDEL	*	map_l150_m2_e1	het	97.5133	97.4026	97.6242	89.7600	900	24	904	22	6	27.2727
qzeng-custom	INDEL	D1_5	map_l100_m1_e0	het	89.6970	83.6228	96.7227	89.7617	1011	198	1151	39	27	69.2308
hfeng-pmm2	INDEL	I1_5	map_l100_m2_e1	hetalt	97.7273	95.5556	100.0000	89.7619	43	2	43	0	0
qzeng-custom	SNP	tv	map_l150_m2_e1	het	83.6864	74.4284	95.5746	89.7620	5469	1879	5464	253	208	82.2134
anovak-vg	INDEL	C6_15	*	*	35.2941	100.0000	21.4286	89.7623	7	0	12	44	5	11.3636
raldana-dualsentieon	SNP	ti	map_l250_m0_e0	homalt	98.9619	98.3945	99.5360	89.7625	429	7	429	2	1	50.0000
qzeng-custom	INDEL	I1_5	map_l100_m2_e1	het	81.0781	72.2222	92.4092	89.7647	585	225	840	69	13	18.8406
ckim-dragen	SNP	*	map_l250_m2_e0	*	97.2970	97.6791	96.9179	89.7648	7702	183	7704	245	31	12.6531
hfeng-pmm2	SNP	tv	map_l250_m2_e1	*	98.3213	98.4225	98.2204	89.7650	2870	46	2870	52	7	13.4615
egarrison-hhga	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	het	79.8100	68.5714	95.4545	89.7674	24	11	21	1	0	0.0000
ckim-dragen	SNP	ti	map_l250_m2_e1	*	97.3249	97.8132	96.8415	89.7690	4965	111	4967	162	20	12.3457
jpowers-varprowl	INDEL	D6_15	map_l125_m1_e0	*	77.6786	74.3590	81.3084	89.7706	87	30	87	20	19	95.0000
eyeh-varpipe	SNP	tv	map_l250_m2_e1	homalt	99.6815	99.5772	99.7861	89.7714	942	4	933	2	2	100.0000
astatham-gatk	SNP	ti	segdup	*	99.2327	98.6385	99.8342	89.7728	19271	266	19269	32	6	18.7500
astatham-gatk	INDEL	I1_5	map_l150_m1_e0	*	96.9972	95.6522	98.3806	89.7744	484	22	486	8	2	25.0000
dgrover-gatk	INDEL	*	map_l125_m2_e0	het	98.0266	98.0590	97.9943	89.7744	1364	27	1368	28	4	14.2857
qzeng-custom	INDEL	*	map_l100_m2_e1	het	83.6323	80.1110	87.4775	89.7782	1877	466	2431	348	54	15.5172
gduggal-bwafb	INDEL	I1_5	map_l150_m2_e0	*	96.7742	95.3757	98.2143	89.7789	495	24	495	9	2	22.2222
ckim-vqsr	INDEL	D1_5	map_l100_m0_e0	*	96.7071	96.9873	96.4286	89.7798	837	26	837	31	4	12.9032
eyeh-varpipe	INDEL	D1_5	map_l150_m1_e0	homalt	97.7289	97.8070	97.6510	89.7805	223	5	291	7	7	100.0000
qzeng-custom	SNP	tv	map_l150_m2_e0	het	83.5782	74.2554	95.5781	89.7806	5385	1867	5382	249	204	81.9277
jmaeng-gatk	INDEL	D6_15	map_l150_m2_e1	homalt	98.2456	96.5517	100.0000	89.7810	28	1	28	0	0
ckim-dragen	INDEL	D6_15	segdup	hetalt	92.3077	85.7143	100.0000	89.7810	42	7	42	0	0
hfeng-pmm2	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	89.7810	42	2	42	0	0
hfeng-pmm1	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	89.7810	42	2	42	0	0
eyeh-varpipe	INDEL	D6_15	map_l125_m1_e0	homalt	82.6646	82.3529	82.9787	89.7826	28	6	39	8	8	100.0000
gduggal-snapfb	INDEL	D6_15	map_l125_m0_e0	*	79.6826	70.2128	92.1053	89.7849	33	14	35	3	3	100.0000
jmaeng-gatk	INDEL	I6_15	segdup	hetalt	97.7273	95.5556	100.0000	89.7862	43	2	43	0	0
anovak-vg	INDEL	I1_5	map_l150_m1_e0	*	60.3183	62.8458	57.9861	89.7890	318	188	334	242	150	61.9835
qzeng-custom	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	92.5939	86.2091	100.0000	89.7909	8014	1282	83	0	0
qzeng-custom	SNP	*	map_l150_m2_e0	het	81.6474	71.2611	95.5780	89.7912	14347	5786	14222	658	550	83.5866
gduggal-snapvard	INDEL	*	map_l125_m1_e0	het	83.6174	95.9551	74.0909	89.7946	1281	54	1793	627	240	38.2775
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	0.0000	0.0000	20.0000	89.7959	0	0	1	4	1	25.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	het	95.4291	95.0000	95.8621	89.7959	152	8	139	6	3	50.0000
ltrigg-rtg1	INDEL	I6_15	map_l125_m0_e0	het	71.4286	55.5556	100.0000	89.7959	5	4	5	0	0
ltrigg-rtg1	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	het	71.4286	55.5556	100.0000	89.7959	5	4	5	0	0
ltrigg-rtg2	INDEL	D16_PLUS	map_l125_m2_e0	*	94.2655	92.5926	96.0000	89.7959	25	2	24	1	0	0.0000
qzeng-custom	SNP	*	map_l125_m1_e0	hetalt	80.0000	66.6667	100.0000	89.7959	20	10	20	0	0
qzeng-custom	SNP	tv	map_l125_m1_e0	hetalt	80.0000	66.6667	100.0000	89.7959	20	10	20	0	0
ckim-gatk	SNP	*	map_l100_m2_e1	hetalt	79.4521	67.4419	96.6667	89.7959	29	14	29	1	1	100.0000
ckim-gatk	SNP	tv	map_l100_m2_e1	hetalt	79.4521	67.4419	96.6667	89.7959	29	14	29	1	1	100.0000
jmaeng-gatk	SNP	tv	segdup	homalt	99.4735	99.1970	99.7516	89.7966	3212	26	3212	8	8	100.0000
jpowers-varprowl	INDEL	I1_5	map_l125_m2_e0	het	93.6864	92.5553	94.8454	89.7981	460	37	460	25	18	72.0000
jlack-gatk	SNP	tv	segdup	homalt	99.8611	99.9074	99.8149	89.7982	3235	3	3235	6	6	100.0000

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