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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 957 958 959 960 961 962 963 964 965 ... 1720 1721 » 48001-48050 / 86044 show all
anovak-vg	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	53.3229	48.2739	59.5513	59.8591	7761	8316	10724	7284	5656	77.6496
mlin-fermikit	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	53.3029	36.7089	97.2763	43.3921	232	400	250	7	7	100.0000
gduggal-snapplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	53.2962	53.7725	52.8282	94.9386	1461	1256	1485	1326	114	8.5973
ndellapenna-hhga	INDEL	D1_5	HG002compoundhet	het	53.2922	85.5324	38.7035	48.7795	1478	250	2006	3177	3125	98.3632
qzeng-custom	INDEL	I6_15	map_l100_m0_e0	*	53.2753	57.5758	49.5726	84.7656	19	14	58	59	1	1.6949
jpowers-varprowl	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	53.2746	85.2632	38.7403	67.1378	1134	196	1144	1809	1797	99.3367
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	53.2627	83.1081	39.1892	51.8438	123	25	87	135	134	99.2593
anovak-vg	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	53.2492	76.3251	40.8875	57.2493	216	67	258	373	323	86.5952
anovak-vg	INDEL	I6_15	map_l100_m2_e1	*	53.2425	49.1379	58.0952	82.0819	57	59	61	44	25	56.8182
ciseli-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	53.2420	85.0543	38.7490	79.7595	939	165	985	1557	105	6.7437
gduggal-snapplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	53.2289	38.9258	84.1491	87.7362	1464	2297	1513	285	71	24.9123
gduggal-snapplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	53.2289	38.9258	84.1491	87.7362	1464	2297	1513	285	71	24.9123
mlin-fermikit	SNP	ti	map_l150_m0_e0	homalt	53.2251	42.7381	70.5320	59.3142	1180	1581	1180	493	459	93.1034
qzeng-custom	INDEL	D16_PLUS	map_l125_m1_e0	*	53.2117	92.5926	37.3333	95.7069	25	2	28	47	0	0.0000
ltrigg-rtg2	INDEL	I6_15	HG002compoundhet	homalt	53.2110	93.5484	37.1795	63.3803	29	2	29	49	49	100.0000
anovak-vg	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	53.2015	46.3732	62.3880	36.5667	748	865	4039	2435	1935	79.4661
jpowers-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	53.1925	58.9431	48.4642	77.5994	145	101	142	151	149	98.6755
gduggal-bwavard	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt	53.1792	36.2205	100.0000	47.1264	46	81	46	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	53.1638	65.0431	44.9536	49.5979	1282	689	3296	4036	3328	82.4579
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	53.1638	65.0431	44.9536	49.5979	1282	689	3296	4036	3328	82.4579
eyeh-varpipe	INDEL	I16_PLUS	segdup	het	53.1401	41.6667	73.3333	84.5361	10	14	11	4	4	100.0000
mlin-fermikit	SNP	*	map_l250_m2_e1	homalt	53.1320	43.3775	68.5465	76.1343	1179	1539	1179	541	500	92.4214
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	53.1306	49.0909	57.8947	66.0714	27	28	11	8	8	100.0000
ciseli-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	53.1268	90.0000	37.6866	90.4490	99	11	101	167	31	18.5629
ciseli-custom	INDEL	I6_15	func_cds	*	53.1250	39.5349	80.9524	32.2581	17	26	17	4	4	100.0000
gduggal-bwafb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	53.1250	38.2022	87.1795	62.1359	34	55	34	5	5	100.0000
mlin-fermikit	INDEL	I1_5	map_l250_m1_e0	homalt	53.1250	38.6364	85.0000	92.5094	17	27	17	3	3	100.0000
gduggal-snapplat	INDEL	I6_15	HG002compoundhet	hetalt	53.1182	36.6874	96.2041	33.7320	3132	5405	3092	122	97	79.5082
ciseli-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	53.1073	38.5246	85.4545	67.2619	47	75	47	8	7	87.5000
bgallagher-sentieon	INDEL	*	HG002compoundhet	homalt	53.1056	99.7085	36.1905	83.1205	684	2	684	1206	1203	99.7512
ckim-isaac	SNP	tv	map_l250_m2_e1	homalt	53.1056	36.1522	100.0000	87.3614	342	604	342	0	0
ckim-isaac	INDEL	D6_15	map_l150_m2_e0	*	53.0973	36.5854	96.7742	93.8247	30	52	30	1	1	100.0000
gduggal-snapfb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	53.0813	57.1912	49.5224	53.3105	676	506	674	687	585	85.1528
gduggal-snapfb	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	53.0788	81.5710	39.3382	71.0021	540	122	642	990	87	8.7879
ciseli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	53.0778	74.8120	41.1290	71.0280	199	67	204	292	37	12.6712
gduggal-snapplat	INDEL	*	tech_badpromoters	homalt	53.0612	39.3939	81.2500	71.9298	13	20	13	3	0	0.0000
gduggal-snapplat	INDEL	D6_15	map_l125_m2_e0	homalt	53.0612	36.1111	100.0000	94.6309	13	23	8	0	0
anovak-vg	INDEL	I1_5	func_cds	het	53.0612	44.0678	66.6667	45.0704	26	33	26	13	3	23.0769
ghariani-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	*	53.0600	50.0000	56.5189	40.9091	865	865	867	667	662	99.2504
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	53.0409	42.6966	70.0000	56.1753	76	102	77	33	31	93.9394
ckim-isaac	SNP	tv	map_l250_m2_e0	homalt	53.0196	36.0726	100.0000	87.3075	338	599	338	0	0
gduggal-snapplat	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_11to50	het	52.9926	40.3952	77.0079	55.5166	1104	1629	978	292	97	33.2192
ckim-isaac	INDEL	D6_15	map_l150_m2_e1	*	52.9915	36.4706	96.8750	93.7864	31	54	31	1	1	100.0000
gduggal-snapplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	52.9704	41.0714	74.5763	89.3694	46	66	44	15	4	26.6667
mlin-fermikit	SNP	*	map_l250_m2_e0	homalt	52.9680	43.1869	68.4770	75.7965	1160	1526	1160	534	494	92.5094
qzeng-custom	INDEL	I16_PLUS	map_l100_m2_e0	het	52.9672	72.2222	41.8182	80.8362	13	5	23	32	0	0.0000
qzeng-custom	INDEL	I16_PLUS	map_l100_m2_e1	het	52.9672	72.2222	41.8182	81.0345	13	5	23	32	0	0.0000
ciseli-custom	INDEL	I6_15	func_cds	het	52.9412	37.5000	90.0000	41.1765	9	15	9	1	1	100.0000
eyeh-varpipe	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	52.9384	36.4654	96.5577	59.1585	3388	5903	3899	139	129	92.8058
eyeh-varpipe	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	52.9384	36.4654	96.5577	59.1585	3388	5903	3899	139	129	92.8058

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