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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 947 948 949 950 951 952 953 954 955 ... 1720 1721 » 47501-47550 / 86044 show all
qzeng-custom	INDEL	I6_15	map_l100_m2_e0	*	56.8558	74.1379	46.1078	77.3098	86	30	154	180	4	2.2222
ciseli-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	56.8514	55.5879	58.1738	61.2449	24089	19246	24394	17539	13551	77.2621
ciseli-custom	SNP	tv	HG002compoundhet	het	56.8474	77.9585	44.7336	53.7648	3643	1030	3678	4544	89	1.9586
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	56.8463	56.2189	57.4879	72.4734	113	88	119	88	85	96.5909
mlin-fermikit	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	56.8303	39.7366	99.7333	37.6559	724	1098	748	2	2	100.0000
anovak-vg	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	56.8293	53.5459	60.5416	56.3805	974	845	1252	816	596	73.0392
anovak-vg	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	56.8293	53.5459	60.5416	56.3805	974	845	1252	816	596	73.0392
mlin-fermikit	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	56.8282	39.6923	100.0000	35.3808	258	392	263	0	0
eyeh-varpipe	INDEL	I1_5	segdup	hetalt	56.8182	41.6667	89.2857	96.7175	20	28	25	3	3	100.0000
jpowers-varprowl	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	56.7953	54.2639	59.5745	64.3309	35462	29889	35420	24035	23631	98.3191
jpowers-varprowl	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	56.7953	54.2639	59.5745	64.3309	35462	29889	35420	24035	23631	98.3191
rpoplin-dv42	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	56.7944	80.4054	43.9024	68.0934	119	29	108	138	138	100.0000
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	56.7901	56.0976	57.5000	80.9524	23	18	23	17	16	94.1176
eyeh-varpipe	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	56.7870	50.7723	64.4183	57.0048	1808	1753	1805	997	979	98.1946
gduggal-snapvard	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	56.7831	40.6681	94.0520	68.9496	767	1119	759	48	45	93.7500
ciseli-custom	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	56.7644	80.9840	43.6963	58.5880	609	143	610	786	670	85.2417
mlin-fermikit	INDEL	D16_PLUS	map_l125_m2_e0	*	56.7568	77.7778	44.6809	93.7831	21	6	21	26	3	11.5385
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	*	56.7073	45.5882	75.0000	86.4865	31	37	30	10	5	50.0000
qzeng-custom	INDEL	I6_15	map_l100_m1_e0	*	56.7042	73.6842	46.0843	75.6598	84	30	153	179	4	2.2346
anovak-vg	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	56.6887	53.0607	60.8492	45.3700	11806	10444	12611	8114	6224	76.7069
qzeng-custom	INDEL	I6_15	map_l100_m2_e1	*	56.6467	74.1379	45.8333	77.4799	86	30	154	182	4	2.1978
ghariani-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	56.6451	52.8614	61.0122	54.6408	1949	1738	1953	1248	1228	98.3974
jpowers-varprowl	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	56.6114	42.2485	85.7701	63.4733	1537	2101	1537	255	235	92.1569
eyeh-varpipe	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	56.6050	50.5432	64.3189	53.8060	977	956	968	537	532	99.0689
egarrison-hhga	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	het	56.6038	75.0000	45.4545	78.4314	6	2	5	6	6	100.0000
qzeng-custom	INDEL	I6_15	map_l150_m1_e0	homalt	56.6038	42.8571	83.3333	90.4762	3	4	10	2	0	0.0000
ciseli-custom	INDEL	C6_15	HG002complexvar	het	56.6038	50.0000	65.2174	92.6045	2	2	15	8	0	0.0000
gduggal-snapfb	INDEL	I6_15	HG002compoundhet	het	56.6000	41.8269	87.5070	19.0965	87	121	4686	669	652	97.4589
eyeh-varpipe	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	56.5909	40.1432	95.8723	58.5392	4205	6270	6759	291	284	97.5945
mlin-fermikit	INDEL	D1_5	map_l250_m2_e0	*	56.5892	42.9348	82.9787	91.5996	79	105	78	16	14	87.5000
mlin-fermikit	SNP	tv	map_l100_m0_e0	het	56.5874	39.7258	98.3185	59.7124	2869	4353	2865	49	0	0.0000
eyeh-varpipe	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	56.5705	40.1699	95.6035	76.3129	6193	9224	10155	467	451	96.5739
gduggal-snapvard	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	56.5642	40.0198	96.4286	46.2791	2430	3642	2673	99	84	84.8485
mlin-fermikit	SNP	*	map_l150_m1_e0	*	56.5558	42.3405	85.1406	61.3631	12960	17649	12955	2261	1991	88.0584
ciseli-custom	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	56.5463	51.0204	63.4146	78.6458	25	24	26	15	14	93.3333
gduggal-bwaplat	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	het	56.5401	41.8750	87.0130	90.2900	67	93	67	10	3	30.0000
gduggal-snapplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	56.5351	42.3182	85.1372	53.5880	1705	2324	1707	298	259	86.9128
ghariani-varprowl	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	56.5337	42.2760	85.3023	63.5610	1538	2100	1538	265	235	88.6792
gduggal-snapvard	INDEL	*	tech_badpromoters	homalt	56.5217	39.3939	100.0000	51.7241	13	20	14	0	0
gduggal-bwaplat	INDEL	D1_5	map_l250_m0_e0	het	56.5217	39.3939	100.0000	99.4522	13	20	13	0	0
mlin-fermikit	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	het	56.5217	100.0000	39.3939	54.1667	13	0	13	20	19	95.0000
anovak-vg	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	56.5143	51.2341	63.0078	48.1760	4878	4643	6033	3542	2746	77.5268
gduggal-snapplat	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	56.5111	56.6123	56.4103	93.4064	625	479	638	493	43	8.7221
mlin-fermikit	SNP	*	map_l125_m0_e0	homalt	56.5095	47.8546	68.9863	54.6729	3212	3500	3212	1444	1335	92.4515
gduggal-snapplat	INDEL	D1_5	*	hetalt	56.5026	42.2548	85.2469	84.6995	4329	5916	4403	762	572	75.0656
gduggal-bwaplat	INDEL	*	map_l250_m1_e0	*	56.4706	39.3443	100.0000	98.8721	120	185	120	0	0
jpowers-varprowl	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	56.4706	58.5366	54.5455	79.5349	24	17	24	20	19	95.0000
ciseli-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	56.4584	55.1138	57.8702	55.3114	17632	14360	17879	13016	10534	80.9312
ciseli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	56.4570	44.2786	77.8761	77.2177	89	112	88	25	20	80.0000
jpowers-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	56.4553	51.6684	62.2197	60.5704	16228	15180	16207	9841	9672	98.2827

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