PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1951-2000 / 86044 show all
bgallagher-sentieonINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
46.6667
80800
bgallagher-sentieonINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
bgallagher-sentieonINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
58.0645
1301300
bgallagher-sentieonINDELI6_15func_cdshet
100.0000
100.0000
100.0000
38.4615
2402400
bgallagher-sentieonINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
71.8245
122012200
bgallagher-sentieonINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.2261
4904900
bgallagher-sentieonINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8611
20200
bgallagher-sentieonINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.3266
20200
bgallagher-sentieonINDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
90.6250
30300
bgallagher-sentieonINDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
92.3077
30300
bgallagher-sentieonINDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
92.6829
30300
bgallagher-sentieonINDELI6_15segduphomalt
100.0000
100.0000
100.0000
92.6448
4704700
bgallagher-sentieonINDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
56.6667
1301300
bgallagher-sentieonINDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
56.2500
70700
bgallagher-sentieonINDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
30300
bgallagher-sentieonINDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
62.5000
30300
bgallagher-sentieonSNP*func_cdshetalt
100.0000
100.0000
100.0000
56.5217
1001000
bgallagher-sentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
86.8421
1501500
bgallagher-sentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
bgallagher-sentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
bgallagher-sentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
56.9829
13830138300
bgallagher-sentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
bgallagher-sentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
bgallagher-sentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.8571
30300
bgallagher-sentieonSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
86.8421
1501500
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.6522
10100
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
95.9016
1501500
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
68.7500
50500
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
64.2857
50500
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
95.7143
90900
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
94.8529
70700
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
97.2973
20200
bgallagher-sentieonSNP*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
88.8889
30300
bgallagher-sentieonSNP*segduphetalt
100.0000
100.0000
100.0000
96.6667
70700
bgallagher-sentieonSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
46.6667
80800
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
83.3333
1201200
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
50.0000
10100
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
50.0000
10100
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
46.5087
858085800
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.1176
10100
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
10100
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
20200
bgallagher-sentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
83.3333
1201200
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
94.7368
10100
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.5318
60600
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
80.0000
20200
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
83.3333
10100
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
94.3262
80800
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
92.5000
60600
bgallagher-sentieonSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.7213
20200