PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
151-200 / 86044 show all
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
97.8723
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
92.3077
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1het
100.0000
100.0000
100.0000
96.5517
30300
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1*
100.0000
100.0000
100.0000
96.5986
50500
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
97.8723
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
92.3077
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e0het
100.0000
100.0000
100.0000
96.4286
30300
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e0*
100.0000
100.0000
100.0000
96.5278
50500
rpoplin-dv42INDELD16_PLUSmap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
92.3077
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m1_e0het
100.0000
100.0000
100.0000
96.0000
30300
rpoplin-dv42INDELD16_PLUSmap_l250_m1_e0*
100.0000
100.0000
100.0000
96.9697
40400
rpoplin-dv42INDELD16_PLUSmap_l250_m0_e0het
100.0000
100.0000
100.0000
97.5610
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m0_e0*
100.0000
100.0000
100.0000
98.5714
10100
rpoplin-dv42INDELD16_PLUSmap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
94.1176
10100
rpoplin-dv42INDELD16_PLUSmap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
93.7500
10100
rpoplin-dv42INDELD16_PLUSmap_l150_m0_e0het
100.0000
100.0000
100.0000
91.9540
70700
rpoplin-dv42INDELD16_PLUSmap_l150_m0_e0*
100.0000
100.0000
100.0000
95.0000
70700
rpoplin-dv42INDELD16_PLUSmap_l125_m2_e1homalt
100.0000
100.0000
100.0000
96.2264
40400
rpoplin-dv42INDELD16_PLUSmap_l125_m2_e0homalt
100.0000
100.0000
100.0000
96.2264
40400
rpoplin-dv42INDELD16_PLUSmap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
85.7143
30300
rpoplin-dv42INDELD16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
95.9596
40400
rpoplin-dv42INDELD16_PLUSmap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
84.2105
30300
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
96.2963
20200
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
92.8571
10100
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0het
100.0000
100.0000
100.0000
92.8000
90900
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0*
100.0000
100.0000
100.0000
93.7824
1201200
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
80.3419
2302300
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
46.1538
1201400
rpoplin-dv42INDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
50.0000
40400
rpoplin-dv42INDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
98.0952
20200
rpoplin-dv42INDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
rpoplin-dv42INDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9953
10100
rpoplin-dv42INDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9996
10100
rpoplin-dv42INDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9304
30300
rpoplin-dv42INDEL*decoyhetalt
100.0000
100.0000
100.0000
99.8494
10100
raldana-dualsentieonSNPtvsegduphetalt
100.0000
100.0000
100.0000
96.2766
70700
raldana-dualsentieonSNPtvmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
88.0952
50500
raldana-dualsentieonSNPtvmap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
87.8049
50500
raldana-dualsentieonSNPtvmap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
88.8889
40400
raldana-dualsentieonSNPtvmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
88.8889
30300
raldana-dualsentieonSNPtvmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
75.0000
90900
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
97.7778
10100
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
98.2456
10100
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
64.2857
50500
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
66.6667
50500
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.2381
10100
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
85.1485
1501500
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.3077
30300
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
raldana-dualsentieonSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200