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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 208 209 210 211 212 213 214 215 216 ... 1720 1721 » 10551-10600 / 86044 show all
hfeng-pmm2	SNP	ti	map_l100_m1_e0	het	99.3403	99.3387	99.3419	67.8029	29744	198	29737	197	16	8.1218
raldana-dualsentieon	SNP	ti	map_l100_m2_e0	*	99.3403	99.3525	99.3281	64.7470	48644	317	48637	329	19	5.7751
jpowers-varprowl	SNP	*	map_l100_m2_e0	homalt	99.3403	99.0226	99.6599	66.2832	27254	269	27254	93	68	73.1183
raldana-dualsentieon	INDEL	I1_5	map_l100_m2_e0	homalt	99.3402	99.2467	99.4340	80.8110	527	4	527	3	2	66.6667
rpoplin-dv42	INDEL	I1_5	*	het	99.3402	99.5015	99.1794	60.2585	78647	394	78679	651	605	92.9339
ltrigg-rtg1	INDEL	I1_5	map_l100_m2_e0	homalt	99.3401	99.4350	99.2453	81.4685	528	3	526	4	2	50.0000
ltrigg-rtg2	SNP	ti	HG002compoundhet	het	99.3400	99.0005	99.6817	37.0509	9410	95	9396	30	8	26.6667
ckim-vqsr	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.3400	98.7394	99.9479	59.7020	3838	49	3838	2	2	100.0000
hfeng-pmm1	INDEL	*	*	*	99.3397	99.0289	99.6526	57.3618	341196	3346	341057	1189	887	74.6005
ltrigg-rtg2	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.3396	99.3548	99.3243	81.1705	154	1	147	1	0	0.0000
rpoplin-dv42	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.3392	99.0283	99.6520	55.6062	6013	59	6013	21	19	90.4762
qzeng-custom	SNP	tv	*	het	99.3391	99.1721	99.5067	29.7409	586805	4899	585578	2903	302	10.4030
dgrover-gatk	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.3391	99.1425	99.5364	69.3276	1503	13	1503	7	2	28.5714
rpoplin-dv42	SNP	ti	map_l100_m1_e0	het	99.3390	99.1350	99.5438	63.8948	29683	259	29675	136	82	60.2941
egarrison-hhga	SNP	*	map_l150_m1_e0	*	99.3388	98.9023	99.7792	73.2772	30273	336	30273	67	32	47.7612
ndellapenna-hhga	SNP	*	map_l100_m2_e0	*	99.3385	98.8697	99.8117	63.7221	73128	836	73130	138	63	45.6522
ltrigg-rtg2	INDEL	I1_5	map_l100_m2_e0	homalt	99.3383	99.0584	99.6198	77.9732	526	5	524	2	1	50.0000
ndellapenna-hhga	SNP	tv	segdup	het	99.3381	99.3569	99.3193	90.2972	5253	34	5253	36	2	5.5556
jli-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.3377	99.4935	99.1825	82.1709	4125	21	4125	34	6	17.6471
jmaeng-gatk	INDEL	*	tech_badpromoters	*	99.3377	98.6842	100.0000	53.9877	75	1	75	0	0
bgallagher-sentieon	INDEL	*	tech_badpromoters	*	99.3377	98.6842	100.0000	54.5455	75	1	75	0	0
cchapple-custom	INDEL	*	tech_badpromoters	*	99.3377	98.6842	100.0000	54.0698	75	1	79	0	0
astatham-gatk	INDEL	*	tech_badpromoters	*	99.3377	98.6842	100.0000	55.0898	75	1	75	0	0
ckim-gatk	INDEL	*	tech_badpromoters	*	99.3377	98.6842	100.0000	54.8193	75	1	75	0	0
ckim-dragen	INDEL	*	tech_badpromoters	*	99.3377	98.6842	100.0000	54.2683	75	1	75	0	0
jli-custom	INDEL	I1_5	segdup	*	99.3377	99.1501	99.5261	94.0200	1050	9	1050	5	2	40.0000
ckim-vqsr	INDEL	*	tech_badpromoters	*	99.3377	98.6842	100.0000	54.8193	75	1	75	0	0
dgrover-gatk	INDEL	*	tech_badpromoters	*	99.3377	98.6842	100.0000	55.0898	75	1	75	0	0
hfeng-pmm2	SNP	ti	map_l100_m2_e0	het	99.3370	99.3436	99.3305	69.0739	30421	201	30414	205	16	7.8049
cchapple-custom	INDEL	I1_5	segdup	*	99.3368	99.1501	99.5243	94.3140	1050	9	1046	5	3	60.0000
raldana-dualsentieon	SNP	ti	map_l100_m1_e0	*	99.3366	99.3470	99.3262	62.8885	47618	313	47611	323	19	5.8824
ckim-isaac	SNP	*	func_cds	homalt	99.3365	98.6818	100.0000	18.1191	6887	92	6887	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	*	99.3362	98.9137	99.7624	51.3621	11746	129	11756	28	14	50.0000
cchapple-custom	INDEL	I1_5	map_siren	homalt	99.3361	98.9274	99.7481	76.2512	1199	13	1188	3	2	66.6667
gduggal-snapvard	SNP	*	func_cds	*	99.3360	99.0138	99.6603	29.3432	17971	179	17895	61	23	37.7049
astatham-gatk	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	het	99.3358	98.7667	99.9115	42.6185	11292	141	11289	10	2	20.0000
egarrison-hhga	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.3357	98.9921	99.6817	59.1116	35062	357	35070	112	48	42.8571
bgallagher-sentieon	SNP	*	map_l250_m2_e1	homalt	99.3355	99.0066	99.6667	86.2231	2691	27	2691	9	7	77.7778
jli-custom	SNP	*	map_l125_m2_e1	*	99.3354	99.1123	99.5595	68.9095	46783	419	46780	207	67	32.3671
ltrigg-rtg2	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.3353	99.0372	99.6352	71.5761	32916	320	32773	120	43	35.8333
ndellapenna-hhga	SNP	*	map_l100_m1_e0	*	99.3352	98.8536	99.8215	61.7229	71573	830	71575	128	61	47.6562
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.3348	99.0173	99.6544	63.3928	27406	272	27397	95	13	13.6842
rpoplin-dv42	INDEL	*	func_cds	homalt	99.3348	99.1150	99.5556	35.7143	224	2	224	1	1	100.0000
asubramanian-gatk	INDEL	*	func_cds	homalt	99.3348	99.1150	99.5556	39.8396	224	2	224	1	1	100.0000
ltrigg-rtg2	INDEL	*	*	het	99.3348	99.1568	99.5135	56.1055	192496	1637	191657	937	230	24.5464
ndellapenna-hhga	SNP	*	map_l250_m2_e1	homalt	99.3346	98.8595	99.8143	86.9517	2687	31	2687	5	5	100.0000
bgallagher-sentieon	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.3343	99.9317	98.7440	74.3514	30740	21	30740	391	384	98.2097
jmaeng-gatk	SNP	ti	HG002compoundhet	het	99.3342	98.8953	99.7771	40.7782	9400	105	9400	21	17	80.9524
ckim-gatk	SNP	ti	HG002complexvar	homalt	99.3341	98.6902	99.9864	18.4846	190929	2534	190919	26	23	88.4615
rpoplin-dv42	INDEL	I1_5	HG002complexvar	het	99.3340	99.1643	99.5043	57.7801	18037	152	18065	90	80	88.8889

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