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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 187 188 189 190 191 192 193 194 195 ... 1720 1721 » 9501-9550 / 86044 show all
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.4642	99.1114	99.8195	47.8833	1673	15	1659	3	3	100.0000
hfeng-pmm2	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.4641	98.9339	100.0000	86.2965	464	5	464	0	0
hfeng-pmm3	SNP	*	map_l150_m2_e1	*	99.4641	99.4070	99.5212	75.5898	32019	191	32013	154	23	14.9351
asubramanian-gatk	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.4640	98.9336	100.0000	64.4882	1670	18	1679	0	0
asubramanian-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4638	99.1979	99.7312	59.5652	371	3	371	1	0	0.0000
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	99.4637	99.3248	99.6031	48.7496	4266	29	4266	17	2	11.7647
astatham-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.4634	98.9987	99.9326	79.6378	1483	15	1483	1	1	100.0000
ltrigg-rtg2	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.4631	98.9319	100.0000	77.5605	1482	16	1503	0	0
eyeh-varpipe	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.4629	99.5028	99.4231	53.9823	1601	8	1551	9	3	33.3333
egarrison-hhga	SNP	ti	map_l125_m1_e0	*	99.4628	99.0932	99.8351	68.9921	29069	266	29069	48	24	50.0000
jmaeng-gatk	SNP	*	segdup	homalt	99.4625	99.0412	99.8873	88.3992	10640	103	10640	12	12	100.0000
astatham-gatk	SNP	*	map_l125_m1_e0	homalt	99.4624	99.0476	99.8807	63.5573	16744	161	16744	20	16	80.0000
astatham-gatk	INDEL	D1_5	map_l125_m2_e1	homalt	99.4624	99.4624	99.4624	86.1090	370	2	370	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l125_m2_e1	homalt	99.4624	99.4624	99.4624	86.0098	370	2	370	2	2	100.0000
hfeng-pmm2	INDEL	D1_5	map_l125_m2_e1	homalt	99.4624	99.4624	99.4624	84.6217	370	2	370	2	2	100.0000
cchapple-custom	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.4624	100.0000	98.9305	81.6667	155	0	185	2	2	100.0000
hfeng-pmm1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.4624	99.5933	99.3319	58.5091	8326	34	8326	56	56	100.0000
hfeng-pmm1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.4624	99.5933	99.3319	58.5091	8326	34	8326	56	56	100.0000
asubramanian-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.4622	99.2509	99.6743	63.1894	265	2	306	1	1	100.0000
hfeng-pmm1	SNP	ti	map_l125_m2_e1	*	99.4622	99.2247	99.7008	70.5014	30332	237	30328	91	25	27.4725
ltrigg-rtg1	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.4618	98.9580	99.9708	57.7056	3419	36	3424	1	0	0.0000
astatham-gatk	INDEL	I1_5	*	*	99.4616	99.2520	99.6722	58.6147	149537	1127	149586	492	402	81.7073
ltrigg-rtg2	INDEL	C1_5	*	hetalt	99.4614	100.0000	98.9286	95.9296	1	0	277	3	3	100.0000
cchapple-custom	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.4613	99.2277	99.6960	43.2493	6681	52	7543	23	17	73.9130
bgallagher-sentieon	SNP	ti	map_l100_m2_e0	*	99.4612	99.5466	99.3760	66.3096	48739	222	48732	306	50	16.3399
hfeng-pmm3	SNP	*	map_l150_m2_e0	*	99.4612	99.4035	99.5190	75.5411	31662	190	31656	153	23	15.0327
hfeng-pmm1	INDEL	D1_5	map_l125_m2_e1	homalt	99.4609	99.1935	99.7297	84.2620	369	3	369	1	1	100.0000
asubramanian-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.4605	99.8195	99.1042	60.8242	3871	7	3872	35	0	0.0000
astatham-gatk	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.4603	98.9667	99.9588	33.4796	7279	76	7275	3	2	66.6667
hfeng-pmm1	SNP	tv	map_l100_m1_e0	het	99.4603	99.2216	99.7001	64.9458	15297	120	15293	46	12	26.0870
asubramanian-gatk	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.4598	98.9813	99.9429	61.0494	1749	18	1751	1	1	100.0000
hfeng-pmm3	SNP	tv	map_l125_m0_e0	homalt	99.4597	99.4597	99.4597	72.3171	2209	12	2209	12	4	33.3333
rpoplin-dv42	SNP	ti	map_l100_m1_e0	*	99.4597	99.2844	99.6356	62.6996	47588	343	47581	174	118	67.8161
astatham-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4595	100.0000	98.9247	69.9029	92	0	92	1	1	100.0000
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4595	100.0000	98.9247	70.0000	92	0	92	1	1	100.0000
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4595	100.0000	98.9247	69.9029	92	0	92	1	1	100.0000
hfeng-pmm1	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4595	100.0000	98.9247	67.9310	92	0	92	1	1	100.0000
jli-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4595	100.0000	98.9247	66.6667	92	0	92	1	1	100.0000
hfeng-pmm2	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4595	100.0000	98.9247	68.2594	92	0	92	1	1	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4595	100.0000	98.9247	70.5696	92	0	92	1	1	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4595	100.0000	98.9247	70.0000	92	0	92	1	1	100.0000
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4595	100.0000	98.9247	70.0000	92	0	92	1	1	100.0000
ltrigg-rtg1	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.4592	98.9243	100.0000	76.3325	2391	26	2389	0	0
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	99.4591	99.4895	99.4288	67.6195	30984	159	30984	178	19	10.6742
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	99.4591	99.4895	99.4288	67.6195	30984	159	30984	178	19	10.6742
ckim-dragen	SNP	tv	map_l125_m0_e0	homalt	99.4590	99.3246	99.5937	66.7118	2206	15	2206	9	7	77.7778
ndellapenna-hhga	INDEL	I1_5	*	homalt	99.4589	99.3199	99.5983	51.5644	60017	411	60008	242	186	76.8595
hfeng-pmm1	SNP	*	map_l125_m1_e0	*	99.4583	99.2389	99.6786	68.9911	44982	345	44976	145	41	28.2759
hfeng-pmm1	SNP	ti	map_l125_m2_e0	*	99.4583	99.2167	99.7011	70.4657	30021	237	30017	90	25	27.7778
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.4583	99.5662	99.3506	78.2639	918	4	918	6	3	50.0000

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