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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 175 176 177 178 179 180 181 182 183 ... 1720 1721 » 8901-8950 / 86044 show all
astatham-gatk	INDEL	I1_5	map_l100_m2_e1	homalt	99.5392	100.0000	99.0826	82.0606	540	0	540	5	4	80.0000
astatham-gatk	INDEL	*	func_cds	het	99.5392	100.0000	99.0826	50.0000	214	0	216	2	0	0.0000
ckim-vqsr	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.5392	100.0000	99.0826	67.8940	216	0	216	2	2	100.0000
dgrover-gatk	INDEL	*	func_cds	het	99.5392	100.0000	99.0826	50.3417	214	0	216	2	0	0.0000
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.5392	100.0000	99.0826	68.3599	216	0	216	2	2	100.0000
ltrigg-rtg2	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.5386	99.2998	99.7786	39.6095	2269	16	2253	5	1	20.0000
hfeng-pmm2	SNP	ti	map_l100_m2_e0	*	99.5384	99.5445	99.5323	66.9341	48738	223	48731	229	30	13.1004
ckim-vqsr	INDEL	I1_5	map_l100_m2_e1	homalt	99.5383	99.8148	99.2634	82.5064	539	1	539	4	3	75.0000
ltrigg-rtg2	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.5382	99.2871	99.7905	44.9407	6685	48	6668	14	4	28.5714
ckim-vqsr	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5376	99.1089	99.9700	56.4901	20019	180	20019	6	6	100.0000
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	99.5376	99.8908	99.1870	59.6192	1829	2	1830	15	1	6.6667
ndellapenna-hhga	SNP	ti	map_siren	*	99.5376	99.2028	99.8746	51.9628	99555	800	99557	125	60	48.0000
jlack-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.5374	99.6524	99.4226	63.8866	860	3	861	5	2	40.0000
ckim-dragen	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.5374	99.6524	99.4226	64.3621	860	3	861	5	3	60.0000
rpoplin-dv42	SNP	ti	map_l125_m1_e0	homalt	99.5372	99.3119	99.7635	66.3061	10969	76	10969	26	25	96.1538
ghariani-varprowl	SNP	ti	*	*	99.5372	99.8784	99.1982	22.5770	2082957	2536	2083186	16837	1291	7.6676
ndellapenna-hhga	SNP	*	segdup	*	99.5371	99.5903	99.4839	89.2221	27952	115	27952	145	51	35.1724
jmaeng-gatk	SNP	tv	*	*	99.5370	99.3842	99.6902	27.5023	963719	5971	963632	2995	80	2.6711
bgallagher-sentieon	SNP	*	map_l125_m0_e0	homalt	99.5370	99.2849	99.7904	67.2503	6664	48	6664	14	10	71.4286
astatham-gatk	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	*	99.5369	99.1334	99.9436	40.3106	10639	93	10639	6	1	16.6667
egarrison-hhga	SNP	*	map_siren	het	99.5365	99.2384	99.8364	54.0342	90298	693	90299	148	53	35.8108
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.5364	99.2047	99.8702	65.5442	16840	135	16932	22	12	54.5455
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.5364	99.2047	99.8702	65.5442	16840	135	16932	22	12	54.5455
egarrison-hhga	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.5363	99.2878	99.7860	56.6980	16312	117	16318	35	21	60.0000
eyeh-varpipe	SNP	ti	*	hetalt	99.5363	99.8282	99.2460	38.4448	581	1	6450	49	47	95.9184
gduggal-snapfb	SNP	*	func_cds	het	99.5360	99.9462	99.1291	30.5670	11155	6	11155	98	1	1.0204
cchapple-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	99.5359	99.7766	99.2963	59.3496	2680	6	2681	19	1	5.2632
dgrover-gatk	SNP	ti	segdup	het	99.5358	99.8337	99.2397	90.9955	12010	20	12008	92	3	3.2609
mlin-fermikit	SNP	*	func_cds	homalt	99.5356	99.8137	99.2590	20.0683	6966	13	6966	52	48	92.3077
hfeng-pmm3	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.5356	99.3048	99.7674	61.5385	857	6	858	2	1	50.0000
hfeng-pmm3	SNP	tv	map_l100_m2_e1	het	99.5354	99.4855	99.5854	67.1367	15856	82	15852	66	5	7.5758
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	99.5351	99.4510	99.6193	87.6224	2355	13	2355	9	9	100.0000
jlack-gatk	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	het	99.5350	99.4806	99.5894	54.0098	3639	19	3638	15	5	33.3333
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.5349	99.0741	100.0000	80.7339	107	1	105	0	0
cchapple-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.5349	99.0741	100.0000	79.9728	107	1	147	0	0
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.5349	99.0741	100.0000	81.1151	107	1	105	0	0
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.5349	99.0741	100.0000	80.6985	107	1	105	0	0
astatham-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.5349	99.0741	100.0000	80.8044	107	1	105	0	0
eyeh-varpipe	SNP	tv	map_l125_m2_e0	hetalt	99.5349	100.0000	99.0741	73.5941	30	0	107	1	0	0.0000
ltrigg-rtg2	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	het	99.5345	99.7661	99.3039	36.1103	2133	5	2140	15	2	13.3333
rpoplin-dv42	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.5344	99.3802	99.6891	63.3219	962	6	962	3	3	100.0000
dgrover-gatk	SNP	ti	map_l100_m1_e0	*	99.5344	99.4763	99.5926	66.0277	47680	251	47673	195	49	25.1282
ndellapenna-hhga	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5343	99.4751	99.5935	60.5291	10044	53	10045	41	39	95.1220
ltrigg-rtg1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.5343	99.1889	99.8821	57.8109	856	7	847	1	1	100.0000
hfeng-pmm3	INDEL	I1_5	segdup	het	99.5342	99.2565	99.8134	94.7961	534	4	535	1	0	0.0000
hfeng-pmm3	SNP	tv	map_l100_m2_e0	het	99.5338	99.4803	99.5875	67.0941	15695	82	15691	65	5	7.6923
bgallagher-sentieon	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	het	99.5336	99.9532	99.1175	38.8352	2137	1	2134	19	2	10.5263
dgrover-gatk	SNP	*	segdup	het	99.5334	99.8152	99.2533	91.5277	17285	32	17279	130	3	2.3077
jlack-gatk	INDEL	I1_5	*	homalt	99.5330	99.8014	99.2660	55.8866	60308	120	60314	446	434	97.3094
ckim-dragen	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.5329	99.6333	99.4326	76.3741	2989	11	2979	17	2	11.7647

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