PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
84051-84100 / 86044 show all
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvsegdupwithalt*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvsegdupwithalthet
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDEL*decoyhetalt
100.0000
100.0000
10000
qzeng-customINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
66.6667
100.0000
21000
qzeng-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
66.6667
100.0000
21000
qzeng-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
10000
qzeng-customINDEL*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
56.2500
100.0000
97000
qzeng-customINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
qzeng-customINDEL*map_l150_m0_e0hetalt
66.6667
100.0000
63000
qzeng-customINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
qzeng-customINDEL*segdupwithalthetalt
0.0000
100.0000
00000
qzeng-customINDEL*segdupwithalthomalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUS*hetalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSHG002complexvarhetalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSHG002compoundhethetalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
57.4074
000230
0.0000
qzeng-customINDELC16_PLUSdecoy*
0.0000
0.0000
99.0909
00010
0.0000
qzeng-customINDELC16_PLUSdecoyhet
0.0000
0.0000
98.6667
00010
0.0000
qzeng-customINDELC16_PLUSdecoyhetalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSdecoyhomalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSfunc_cds*
0.0000
0.0000
60.0000
00040
0.0000
qzeng-customINDELC16_PLUSfunc_cdshet
0.0000
0.0000
83.3333
00010
0.0000
qzeng-customINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
25.0000
00030
0.0000
qzeng-customINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
96.1240
00050
0.0000
qzeng-customINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
93.7500
00010
0.0000
qzeng-customINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
90.0000
00010
0.0000
qzeng-customINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000