PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83201-83250 / 86044 show all
qzeng-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
50.0000
100.0000
11000
qzeng-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
95.8140
000270
0.0000
qzeng-customINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
qzeng-customINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
qzeng-customINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
50.0000
100.0000
66000
qzeng-customINDELI6_15map_l150_m0_e0hetalt
0.0000
100.0000
00000
qzeng-customINDELI6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
qzeng-customINDELI6_15map_l250_m1_e0hetalt
0.0000
100.0000
00000
qzeng-customINDELI6_15segdupwithalt*
0.0000
100.0000
00000
qzeng-customINDELI6_15segdupwithalthet
0.0000
100.0000
00000
qzeng-customINDELI6_15segdupwithalthetalt
0.0000
100.0000
00000
qzeng-customINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
qzeng-customSNP*decoyhet
0.0000
100.0000
00000
qzeng-customSNP*decoyhetalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
qzeng-customSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
96.9697
02021
50.0000
qzeng-customSNP*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customSNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
100.0000
00000
qzeng-customSNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
qzeng-customSNP*segdupwithalt*
0.0000
100.0000
00000