PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
69051-69100 / 86044 show all
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
99.7368
00010
0.0000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
98.6486
00010
0.0000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
100.0000
100.0000
30000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m0_e0*
0.0000
0.0000
99.4845
00010
0.0000
jlack-gatkINDELI16_PLUSmap_l250_m0_e0het
0.0000
0.0000
99.0826
00010
0.0000
jlack-gatkINDELI16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m1_e0hetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m2_e0hetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m2_e0homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m2_e1hetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m2_e1homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5decoy*
0.0000
100.0000
00000
jlack-gatkINDELI1_5decoyhet
0.0000
100.0000
00000
jlack-gatkINDELI1_5decoyhetalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5decoyhomalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
94.7368
00011
100.0000
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000