PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1303 1304 1305 1306 1307 1308 1309 1310 1311 ... 1720 1721 » 65301-65350 / 86044 show all
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	0.0000	0.0000	81.2500	0	0	0	3	1	33.3333
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	0.0000	0.0000	80.0000	0	0	0	3	1	33.3333
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	0.0000	0.0000	89.2857	0	0	0	6	2	33.3333
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	0.0000	0.0000	88.4615	0	0	0	6	2	33.3333
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	0.0000	0.0000	92.6829	0	0	0	3	1	33.3333
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	0.0000	0.0000	92.1053	0	0	0	3	1	33.3333
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	*	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	het	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	het	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	*	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	het	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	homalt	0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	*	0.0000	0.0000	80.0000	0	0	0	2	1	50.0000
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	het	0.0000	0.0000	77.7778	0	0	0	2	1	50.0000
gduggal-snapvard	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge