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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 106 107 108 109 110 111 112 113 114 ... 1720 1721 » 5451-5500 / 86044 show all
rpoplin-dv42	SNP	ti	HG002complexvar	homalt	99.9574	99.9530	99.9617	18.4113	193372	91	193367	74	72	97.2973
dgrover-gatk	SNP	ti	*	*	99.9570	99.9639	99.9500	17.7617	2084759	752	2084696	1042	126	12.0921
gduggal-snapfb	SNP	*	func_cds	homalt	99.9570	99.9857	99.9284	24.3691	6978	1	6978	5	1	20.0000
bgallagher-sentieon	SNP	ti	HG002complexvar	*	99.9558	99.9337	99.9780	17.4939	508099	337	508035	112	53	47.3214
hfeng-pmm3	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.9556	99.9112	100.0000	52.9781	2250	2	2250	0	0
jmaeng-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.9556	99.9112	100.0000	52.0358	2250	2	2250	0	0
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.9556	99.9112	100.0000	51.6129	2250	2	2250	0	0
dgrover-gatk	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.9554	99.9406	99.9703	49.4797	10096	6	10096	3	3	100.0000
ckim-dragen	SNP	*	HG002complexvar	homalt	99.9551	99.9245	99.9858	19.8995	288356	218	288565	41	41	100.0000
hfeng-pmm3	SNP	*	*	*	99.9548	99.9339	99.9756	18.3516	3052601	2018	3052460	744	76	10.2151
hfeng-pmm1	SNP	ti	*	*	99.9548	99.9307	99.9789	16.7547	2084065	1446	2084007	440	67	15.2273
astatham-gatk	SNP	ti	HG002complexvar	homalt	99.9545	99.9214	99.9876	18.3169	193311	152	193301	24	24	100.0000
egarrison-hhga	SNP	tv	func_cds	*	99.9543	100.0000	99.9086	28.4546	4371	0	4371	4	0	0.0000
jli-custom	SNP	tv	HG002complexvar	homalt	99.9542	99.9254	99.9832	22.8543	95040	71	95029	16	11	68.7500
bgallagher-sentieon	SNP	*	HG002complexvar	*	99.9538	99.9332	99.9744	19.0217	753877	504	753722	193	84	43.5233
jli-custom	SNP	ti	*	*	99.9536	99.9637	99.9435	16.8976	2084755	756	2084716	1179	130	11.0263
rpoplin-dv42	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	het	99.9532	99.9532	99.9531	38.2523	2137	1	2133	1	1	100.0000
dgrover-gatk	SNP	ti	HG002complexvar	*	99.9530	99.9268	99.9791	17.5262	508064	372	508000	106	56	52.8302
ckim-dragen	SNP	ti	HG002complexvar	homalt	99.9527	99.9214	99.9840	18.3095	193311	152	193417	31	31	100.0000
ltrigg-rtg2	SNP	ti	func_cds	homalt	99.9526	99.9052	100.0000	20.2844	5270	5	5270	0	0
astatham-gatk	SNP	ti	func_cds	homalt	99.9526	99.9052	100.0000	19.7136	5270	5	5270	0	0
dgrover-gatk	SNP	*	HG002complexvar	*	99.9517	99.9260	99.9773	19.0606	753823	558	753668	171	88	51.4620
astatham-gatk	SNP	*	HG002complexvar	homalt	99.9516	99.9158	99.9875	19.8527	288331	243	288306	36	34	94.4444
rpoplin-dv42	SNP	tv	*	*	99.9512	99.9420	99.9604	21.8980	969128	562	969027	384	163	42.4479
rpoplin-dv42	SNP	*	HG002complexvar	homalt	99.9511	99.9421	99.9601	19.9304	288407	167	288378	115	109	94.7826
rpoplin-dv42	SNP	ti	*	het	99.9511	99.9279	99.9742	18.1937	1280967	924	1280907	330	164	49.6970
raldana-dualsentieon	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9509	99.9705	99.9313	54.2320	10175	3	10175	7	7	100.0000
raldana-dualsentieon	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9507	99.9671	99.9343	54.3615	6086	2	6086	4	4	100.0000
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9507	99.9014	100.0000	54.7268	6082	6	6082	0	0
hfeng-pmm2	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.9505	99.9307	99.9703	51.1679	10095	7	10095	3	2	66.6667
cchapple-custom	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9498	99.9248	99.9749	29.7121	3984	3	3978	1	1	100.0000
astatham-gatk	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9498	99.8997	100.0000	34.2631	3983	4	3983	0	0
hfeng-pmm1	SNP	*	*	*	99.9496	99.9227	99.9766	18.0950	3052257	2362	3052118	715	107	14.9650
bgallagher-sentieon	SNP	tv	HG002complexvar	*	99.9492	99.9313	99.9671	22.0213	245983	169	245892	81	31	38.2716
jlack-gatk	SNP	ti	HG002complexvar	homalt	99.9491	99.9163	99.9819	18.2375	193301	162	193290	35	32	91.4286
dgrover-gatk	SNP	tv	HG002complexvar	*	99.9486	99.9236	99.9736	22.0729	245964	188	245873	65	32	49.2308
cchapple-custom	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9485	99.9228	99.9742	56.3906	3884	3	3875	1	0	0.0000
hfeng-pmm2	SNP	ti	*	*	99.9484	99.9340	99.9629	17.4396	2084135	1376	2084077	774	72	9.3023
cchapple-custom	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9481	99.9110	99.9851	30.4766	6739	6	6724	1	1	100.0000
ckim-dragen	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9481	99.9259	99.9703	34.6642	6740	5	6740	2	2	100.0000
hfeng-pmm2	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.9480	99.9257	99.9703	57.5983	20184	15	20184	6	5	83.3333
bgallagher-sentieon	SNP	ti	HG002complexvar	het	99.9477	99.9234	99.9720	16.9632	314525	241	314471	88	29	32.9545
egarrison-hhga	SNP	*	func_cds	*	99.9477	99.9725	99.9229	23.9159	18145	5	18145	14	0	0.0000
bgallagher-sentieon	SNP	ti	*	*	99.9476	99.9680	99.9272	17.4519	2084844	667	2084781	1519	117	7.7024
rpoplin-dv42	SNP	*	*	het	99.9475	99.9278	99.9673	19.5765	1872234	1353	1872094	613	268	43.7194
cchapple-custom	SNP	ti	*	homalt	99.9468	99.8984	99.9953	15.1867	802222	816	801552	38	34	89.4737
hfeng-pmm1	SNP	ti	segdup	homalt	99.9467	99.9600	99.9334	88.2045	7502	3	7502	5	5	100.0000
jli-custom	SNP	ti	HG002complexvar	*	99.9464	99.9180	99.9748	17.5160	508019	417	507979	128	58	45.3125
astatham-gatk	SNP	tv	HG002complexvar	homalt	99.9458	99.9043	99.9874	22.8056	95020	91	95005	12	10	83.3333
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.9456	99.9406	99.9505	49.3379	10096	6	10096	5	5	100.0000

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