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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 104 105 106 107 108 109 110 111 112 ... 1720 1721 » 5351-5400 / 86044 show all
ckim-dragen	SNP	ti	func_cds	homalt	99.9810	99.9621	100.0000	20.1424	5273	2	5273	0	0
egarrison-hhga	SNP	ti	func_cds	homalt	99.9810	99.9621	100.0000	20.9919	5273	2	5273	0	0
eyeh-varpipe	SNP	ti	func_cds	homalt	99.9810	99.9621	100.0000	20.7688	5273	2	5215	0	0
rpoplin-dv42	SNP	ti	*	homalt	99.9800	99.9747	99.9853	16.8487	802835	203	802832	118	106	89.8305
hfeng-pmm2	SNP	ti	HG002complexvar	homalt	99.9798	99.9757	99.9840	18.5051	193416	47	193407	31	31	100.0000
raldana-dualsentieon	SNP	*	HG002complexvar	homalt	99.9794	99.9695	99.9893	19.8637	288486	88	288471	31	29	93.5484
gduggal-bwafb	SNP	*	func_cds	homalt	99.9785	99.9570	100.0000	23.2732	6976	3	6976	0	0
jli-custom	SNP	*	func_cds	homalt	99.9785	99.9570	100.0000	21.0413	6976	3	6976	0	0
bgallagher-sentieon	SNP	*	func_cds	homalt	99.9785	99.9570	100.0000	20.9518	6976	3	6976	0	0
dgrover-gatk	SNP	*	func_cds	homalt	99.9785	99.9570	100.0000	20.9966	6976	3	6976	0	0
jli-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.9778	99.9556	100.0000	51.9120	2251	1	2251	0	0
raldana-dualsentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.9778	99.9556	100.0000	51.6849	2251	1	2251	0	0
hfeng-pmm1	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.9778	99.9556	100.0000	53.1919	2251	1	2251	0	0
bgallagher-sentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.9778	99.9556	100.0000	51.4033	2251	1	2251	0	0
hfeng-pmm2	SNP	*	HG002complexvar	homalt	99.9776	99.9726	99.9827	20.0544	288495	79	288481	50	44	88.0000
hfeng-pmm3	SNP	tv	HG002complexvar	homalt	99.9769	99.9643	99.9895	22.8756	95077	34	95069	10	9	90.0000
rpoplin-dv42	SNP	*	*	homalt	99.9769	99.9716	99.9821	18.2100	1179826	335	1179802	211	157	74.4076
astatham-gatk	SNP	ti	*	homalt	99.9764	99.9582	99.9946	15.8604	802702	336	802693	43	41	95.3488
hfeng-pmm1	SNP	tv	HG002complexvar	homalt	99.9763	99.9664	99.9863	22.9407	95079	32	95072	13	11	84.6154
raldana-dualsentieon	SNP	tv	HG002complexvar	homalt	99.9758	99.9632	99.9884	22.8157	95076	35	95070	11	9	81.8182
ckim-dragen	SNP	tv	*	homalt	99.9757	99.9621	99.9894	19.9141	376980	143	377083	40	29	72.5000
hfeng-pmm2	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9754	99.9671	99.9836	54.9478	6086	2	6086	1	1	100.0000
jli-custom	SNP	ti	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9749	99.9498	100.0000	34.6400	3985	2	3985	0	0
hfeng-pmm1	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9743	99.9743	99.9743	59.5146	3886	1	3886	1	1	100.0000
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9743	99.9743	99.9743	59.5233	3886	1	3888	1	1	100.0000
astatham-gatk	SNP	*	*	homalt	99.9742	99.9548	99.9936	17.1971	1179627	534	1179603	76	67	88.1579
hfeng-pmm2	SNP	tv	HG002complexvar	homalt	99.9732	99.9664	99.9800	23.0303	95079	32	95074	19	13	68.4211
ckim-dragen	SNP	*	*	homalt	99.9725	99.9534	99.9917	17.1093	1179611	550	1179821	98	80	81.6327
eyeh-varpipe	SNP	ti	*	homalt	99.9720	99.9710	99.9731	16.3629	802806	233	790297	213	89	41.7840
gduggal-bwafb	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	21.6059	5272	3	5272	0	0
jli-custom	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	19.7443	5272	3	5272	0	0
dgrover-gatk	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	19.7443	5272	3	5272	0	0
bgallagher-sentieon	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	19.6954	5272	3	5272	0	0
gduggal-snapfb	SNP	ti	func_cds	homalt	99.9716	99.9810	99.9621	22.5825	5274	1	5274	2	1	50.0000
rpoplin-dv42	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	21.4775	5272	3	5272	0	0
rpoplin-dv42	SNP	*	func_cds	homalt	99.9713	99.9427	100.0000	23.1405	6975	4	6975	0	0
cchapple-custom	SNP	*	func_cds	homalt	99.9713	99.9427	100.0000	20.5695	6975	4	6974	0	0
jlack-gatk	SNP	*	func_cds	homalt	99.9713	99.9427	100.0000	21.3464	6975	4	6975	0	0
ckim-dragen	SNP	ti	*	homalt	99.9710	99.9493	99.9928	15.7227	802631	407	802738	58	51	87.9310
rpoplin-dv42	SNP	tv	func_cds	homalt	99.9706	99.9413	100.0000	27.8695	1703	1	1703	0	0
hfeng-pmm1	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9703	99.9703	99.9703	36.7854	6743	2	6743	2	2	100.0000
hfeng-pmm1	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.9703	99.9604	99.9802	50.4100	10098	4	10098	2	2	100.0000
rpoplin-dv42	SNP	tv	*	homalt	99.9702	99.9650	99.9753	20.9652	376991	132	376970	93	51	54.8387
ltrigg-rtg2	SNP	ti	*	homalt	99.9701	99.9529	99.9873	15.8538	802658	378	802554	102	98	96.0784
jlack-gatk	SNP	ti	*	homalt	99.9698	99.9522	99.9874	15.9699	802654	384	802644	101	66	65.3465
eyeh-varpipe	SNP	*	*	homalt	99.9696	99.9699	99.9693	17.3914	1179807	355	1154702	355	142	40.0000
bgallagher-sentieon	SNP	ti	HG002complexvar	homalt	99.9695	99.9514	99.9876	18.3190	193369	94	193359	24	24	100.0000
astatham-gatk	SNP	tv	*	homalt	99.9694	99.9475	99.9912	19.9071	376925	198	376910	33	26	78.7879
ltrigg-rtg2	SNP	*	*	homalt	99.9694	99.9515	99.9872	17.0159	1179585	572	1179505	151	139	92.0530
jlack-gatk	SNP	*	*	homalt	99.9692	99.9511	99.9872	17.3366	1179584	577	1179556	151	96	63.5762

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