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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 778 779 780 781 782 783 784 785 786 ... 1720 1721 » 39051-39100 / 86044 show all
eyeh-varpipe	INDEL	D16_PLUS	HG002complexvar	*	59.4403	51.7955	69.7324	50.7211	851	792	834	362	361	99.7238
gduggal-snapplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	59.4534	45.9538	84.1837	88.0196	159	187	165	31	5	16.1290
ckim-isaac	INDEL	D6_15	map_l125_m2_e1	*	59.4595	42.9688	96.4912	90.9236	55	73	55	2	2	100.0000
ckim-isaac	INDEL	D6_15	map_l150_m1_e0	homalt	59.4595	42.3077	100.0000	77.5510	11	15	11	0	0
gduggal-bwavard	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	59.4595	59.4595	59.4595	84.3882	22	15	22	15	6	40.0000
eyeh-varpipe	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	het	59.4595	45.8333	84.6154	35.0000	11	13	11	2	2	100.0000
mlin-fermikit	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	59.4595	73.3333	50.0000	96.4630	11	4	11	11	7	63.6364
mlin-fermikit	INDEL	D16_PLUS	map_l150_m1_e0	*	59.4595	73.3333	50.0000	93.6047	11	4	11	11	2	18.1818
qzeng-custom	INDEL	I6_15	map_l250_m2_e0	*	59.4595	50.0000	73.3333	97.3022	4	4	11	4	1	25.0000
qzeng-custom	INDEL	I6_15	map_l250_m2_e1	*	59.4595	50.0000	73.3333	97.3684	4	4	11	4	1	25.0000
ckim-isaac	SNP	tv	map_l150_m1_e0	homalt	59.4623	42.3213	99.9402	68.6492	1670	2276	1670	1	1	100.0000
anovak-vg	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	59.4656	87.5000	45.0363	57.4665	175	25	186	227	205	90.3084
gduggal-snapfb	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	59.4713	60.2535	58.7091	58.8203	1331	878	1328	934	788	84.3683
anovak-vg	INDEL	I1_5	map_l125_m2_e0	*	59.4733	61.3769	57.6842	87.5801	526	331	548	402	273	67.9104
ciseli-custom	INDEL	I1_5	map_l125_m2_e1	*	59.4882	53.3333	67.2489	88.9869	464	406	462	225	194	86.2222
ghariani-varprowl	INDEL	I16_PLUS	map_siren	*	59.4937	54.6512	65.2778	81.5385	47	39	47	25	24	96.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	59.5041	44.4444	90.0000	83.0508	4	5	9	1	1	100.0000
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	59.5098	45.1054	87.4307	85.0479	4193	5103	4257	612	532	86.9281
mlin-fermikit	INDEL	I1_5	map_l150_m2_e1	het	59.5186	42.9022	97.1429	85.6704	136	181	136	4	2	50.0000
gduggal-snapfb	INDEL	*	map_l100_m2_e1	hetalt	59.5248	47.7273	79.0698	93.2917	63	69	34	9	5	55.5556
mlin-fermikit	SNP	tv	map_l150_m1_e0	homalt	59.5283	52.1287	69.3761	55.9108	2057	1889	2057	908	841	92.6211
ckim-vqsr	SNP	ti	map_l250_m2_e0	*	59.5430	42.6717	98.4793	97.0358	2137	2871	2137	33	0	0.0000
anovak-vg	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	59.5457	53.6378	66.9161	58.0784	2020	1746	2146	1061	754	71.0650
anovak-vg	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	59.5457	53.6378	66.9161	58.0784	2020	1746	2146	1061	754	71.0650
gduggal-snapvard	INDEL	I6_15	map_siren	*	59.5493	55.7377	63.9205	78.6148	170	135	225	127	95	74.8031
gduggal-bwavard	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	59.5561	42.5651	99.1245	51.1308	1603	2163	1585	14	12	85.7143
gduggal-bwavard	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	59.5561	42.5651	99.1245	51.1308	1603	2163	1585	14	12	85.7143
ciseli-custom	SNP	tv	map_l250_m1_e0	het	59.5668	53.4415	67.2779	93.2143	955	832	954	464	21	4.5259
ndellapenna-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	59.5731	42.4788	99.6904	42.1147	401	543	322	1	1	100.0000
ciseli-custom	INDEL	*	map_l250_m2_e0	homalt	59.5745	48.6957	76.7123	96.9159	56	59	56	17	11	64.7059
eyeh-varpipe	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	59.5745	50.0000	73.6842	74.3243	25	25	28	10	7	70.0000
eyeh-varpipe	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	59.5745	66.6667	53.8462	93.8095	4	2	7	6	6	100.0000
ghariani-varprowl	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	*	59.5761	58.3242	60.8829	60.3781	21342	15250	21309	13691	13201	96.4210
eyeh-varpipe	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	59.5793	42.8121	97.9353	47.2358	1629	2176	3178	67	62	92.5373
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	59.5825	43.7326	93.4524	71.9533	157	202	157	11	10	90.9091
gduggal-snapvard	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	59.5875	61.0924	58.1549	41.9454	3624	2308	5623	4046	3831	94.6861
gduggal-bwaplat	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	59.5931	46.9320	81.6092	83.6389	283	320	284	64	1	1.5625
gduggal-bwaplat	SNP	ti	map_l250_m2_e0	het	59.6085	42.5630	99.4265	97.5359	1385	1869	1387	8	2	25.0000
mlin-fermikit	SNP	*	map_l100_m0_e0	*	59.6148	45.9548	84.8308	53.4081	15092	17749	15088	2698	2419	89.6590
jpowers-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	59.6174	68.6837	52.6656	65.6874	647	295	652	586	580	98.9761
gduggal-snapplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	59.6364	59.0060	60.2804	68.5856	4357	3027	6148	4051	1556	38.4103
qzeng-custom	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	hetalt	59.6413	42.4920	100.0000	90.0000	532	720	1	0	0
ghariani-varprowl	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	59.6441	58.6663	60.6552	76.8269	38339	27012	38291	24838	23765	95.6800
ghariani-varprowl	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	59.6441	58.6663	60.6552	76.8269	38339	27012	38291	24838	23765	95.6800
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	59.6473	59.7203	59.5745	39.9758	12300	8296	17724	12027	10545	87.6777
qzeng-custom	INDEL	I1_5	map_l250_m1_e0	homalt	59.6512	43.1818	96.4286	96.5895	19	25	27	1	0	0.0000
ciseli-custom	INDEL	D16_PLUS	*	*	59.6718	52.7860	68.6237	57.6195	3581	3203	3565	1630	1503	92.2086
gduggal-snapvard	INDEL	I6_15	map_l125_m1_e0	*	59.6747	64.1509	55.7823	82.2678	34	19	82	65	50	76.9231
qzeng-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	59.6849	56.0000	63.8889	83.7838	14	11	23	13	5	38.4615
gduggal-bwavard	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	59.6850	58.5729	60.8400	68.6799	38278	27073	38154	24558	22520	91.7013

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