PrecisionFDA
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
33551-33600 / 86044 show all | |||||||||||||||
| ciseli-custom | INDEL | C1_5 | map_l100_m0_e0 | * | 0.0000 | 0.0000 | 10.0000 | 97.7528 | 0 | 0 | 1 | 9 | 2 | 22.2222 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m0_e0 | homalt | 0.0000 | 0.0000 | 10.0000 | 96.0784 | 0 | 0 | 1 | 9 | 2 | 22.2222 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m1_e0 | * | 0.0000 | 0.0000 | 9.0909 | 97.3430 | 0 | 0 | 2 | 20 | 4 | 20.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m1_e0 | het | 0.0000 | 0.0000 | 33.3333 | 99.0476 | 0 | 0 | 1 | 2 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m1_e0 | homalt | 0.0000 | 0.0000 | 5.2632 | 96.2963 | 0 | 0 | 1 | 18 | 4 | 22.2222 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e0 | * | 0.0000 | 0.0000 | 8.6957 | 97.4918 | 0 | 0 | 2 | 21 | 4 | 19.0476 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e0 | het | 0.0000 | 0.0000 | 33.3333 | 99.1329 | 0 | 0 | 1 | 2 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e0 | homalt | 0.0000 | 0.0000 | 5.0000 | 96.4974 | 0 | 0 | 1 | 19 | 4 | 21.0526 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e1 | * | 0.0000 | 0.0000 | 8.6957 | 97.5162 | 0 | 0 | 2 | 21 | 4 | 19.0476 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e1 | het | 0.0000 | 0.0000 | 33.3333 | 99.1404 | 0 | 0 | 1 | 2 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l100_m2_e1 | homalt | 0.0000 | 0.0000 | 5.0000 | 96.5338 | 0 | 0 | 1 | 19 | 4 | 21.0526 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m0_e0 | * | 0.0000 | 0.0000 | 20.0000 | 98.5030 | 0 | 0 | 1 | 4 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m0_e0 | homalt | 0.0000 | 0.0000 | 20.0000 | 97.4093 | 0 | 0 | 1 | 4 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m1_e0 | * | 0.0000 | 0.0000 | 6.2500 | 97.3899 | 0 | 0 | 1 | 15 | 2 | 13.3333 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m1_e0 | homalt | 0.0000 | 0.0000 | 7.1429 | 96.2060 | 0 | 0 | 1 | 13 | 2 | 15.3846 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m2_e0 | * | 0.0000 | 0.0000 | 5.8824 | 97.5398 | 0 | 0 | 1 | 16 | 2 | 12.5000 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m2_e0 | homalt | 0.0000 | 0.0000 | 6.6667 | 96.4706 | 0 | 0 | 1 | 14 | 2 | 14.2857 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m2_e1 | * | 0.0000 | 0.0000 | 5.8824 | 97.5540 | 0 | 0 | 1 | 16 | 2 | 12.5000 | |
| ciseli-custom | INDEL | C1_5 | map_l125_m2_e1 | homalt | 0.0000 | 0.0000 | 6.6667 | 96.4871 | 0 | 0 | 1 | 14 | 2 | 14.2857 | |
| ciseli-custom | INDEL | C1_5 | map_l150_m0_e0 | * | 0.0000 | 0.0000 | 50.0000 | 99.2701 | 0 | 0 | 1 | 1 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l150_m0_e0 | homalt | 0.0000 | 0.0000 | 50.0000 | 98.7013 | 0 | 0 | 1 | 1 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l150_m1_e0 | * | 0.0000 | 0.0000 | 11.1111 | 98.2387 | 0 | 0 | 1 | 8 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l150_m1_e0 | homalt | 0.0000 | 0.0000 | 14.2857 | 97.6898 | 0 | 0 | 1 | 6 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l150_m2_e0 | * | 0.0000 | 0.0000 | 10.0000 | 98.2699 | 0 | 0 | 1 | 9 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l150_m2_e0 | homalt | 0.0000 | 0.0000 | 12.5000 | 97.7208 | 0 | 0 | 1 | 7 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l150_m2_e1 | * | 0.0000 | 0.0000 | 10.0000 | 98.2818 | 0 | 0 | 1 | 9 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_l150_m2_e1 | homalt | 0.0000 | 0.0000 | 12.5000 | 97.7337 | 0 | 0 | 1 | 7 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_siren | * | 0.0000 | 0.0000 | 17.3913 | 96.3978 | 0 | 0 | 8 | 38 | 6 | 15.7895 | |
| ciseli-custom | INDEL | C1_5 | map_siren | het | 0.0000 | 0.0000 | 33.3333 | 99.2629 | 0 | 0 | 1 | 2 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | map_siren | homalt | 0.0000 | 0.0000 | 16.2791 | 95.0575 | 0 | 0 | 7 | 36 | 6 | 16.6667 | |
| ciseli-custom | INDEL | C1_5 | segdup | * | 0.0000 | 0.0000 | 21.0526 | 98.7821 | 0 | 0 | 4 | 15 | 4 | 26.6667 | |
| ciseli-custom | INDEL | C1_5 | segdup | het | 0.0000 | 0.0000 | 33.3333 | 99.4286 | 0 | 0 | 1 | 2 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C1_5 | segdup | homalt | 0.0000 | 0.0000 | 18.7500 | 98.4541 | 0 | 0 | 3 | 13 | 4 | 30.7692 | |
| ciseli-custom | INDEL | C6_15 | * | homalt | 0.0000 | 0.0000 | 18.3432 | 95.1255 | 0 | 0 | 31 | 138 | 44 | 31.8841 | |
| ciseli-custom | INDEL | C6_15 | HG002complexvar | homalt | 0.0000 | 0.0000 | 19.6429 | 91.7708 | 0 | 0 | 22 | 90 | 37 | 41.1111 | |
| ciseli-custom | INDEL | C6_15 | HG002compoundhet | * | 0.0000 | 0.0000 | 4.8193 | 89.6894 | 0 | 0 | 4 | 79 | 28 | 35.4430 | |
| ciseli-custom | INDEL | C6_15 | HG002compoundhet | het | 0.0000 | 0.0000 | 66.6667 | 96.0265 | 0 | 0 | 4 | 2 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 29.4118 | 97.1808 | 0 | 0 | 5 | 12 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | het | 0.0000 | 0.0000 | 75.0000 | 97.7401 | 0 | 0 | 3 | 1 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 15.3846 | 96.9484 | 0 | 0 | 2 | 11 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_AllRepeats_lt51bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 15.7895 | 95.5649 | 0 | 0 | 15 | 80 | 22 | 27.5000 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | * | 0.0000 | 0.0000 | 24.5902 | 96.0721 | 0 | 0 | 30 | 92 | 24 | 26.0870 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | het | 0.0000 | 0.0000 | 57.8947 | 97.7778 | 0 | 0 | 11 | 8 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | homalt | 0.0000 | 0.0000 | 18.4466 | 95.4243 | 0 | 0 | 19 | 84 | 24 | 28.5714 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | * | 0.0000 | 0.0000 | 50.0000 | 94.6237 | 0 | 0 | 5 | 5 | 2 | 40.0000 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | het | 0.0000 | 0.0000 | 100.0000 | 98.4615 | 0 | 0 | 1 | 0 | 0 | ||
| ciseli-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 44.4444 | 92.5620 | 0 | 0 | 4 | 5 | 2 | 40.0000 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | * | 0.0000 | 0.0000 | 50.0000 | 93.3775 | 0 | 0 | 5 | 5 | 2 | 40.0000 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | het | 0.0000 | 0.0000 | 100.0000 | 98.2759 | 0 | 0 | 1 | 0 | 0 | ||
| ciseli-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 44.4444 | 90.3226 | 0 | 0 | 4 | 5 | 2 | 40.0000 | |