PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1951-2000 / 86044 show all
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvsegdupwithalt*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvsegdupwithalthet
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDEL*decoyhetalt
100.0000
100.0000
10000
qzeng-customINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
66.6667
100.0000
21000
qzeng-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
66.6667
100.0000
21000
qzeng-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
10000
qzeng-customINDEL*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
56.2500
100.0000
97000
qzeng-customINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
qzeng-customINDEL*map_l150_m0_e0hetalt
66.6667
100.0000
63000
qzeng-customINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
qzeng-customINDEL*segdupwithalthetalt
0.0000
100.0000
00000
qzeng-customINDEL*segdupwithalthomalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUS*hetalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSHG002complexvarhetalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSHG002compoundhethetalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
57.4074
000230
0.0000
qzeng-customINDELC16_PLUSdecoy*
0.0000
0.0000
99.0909
00010
0.0000
qzeng-customINDELC16_PLUSdecoyhet
0.0000
0.0000
98.6667
00010
0.0000
qzeng-customINDELC16_PLUSdecoyhetalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSdecoyhomalt
0.0000
100.0000
00000
qzeng-customINDELC16_PLUSfunc_cds*
0.0000
0.0000
60.0000
00040
0.0000
qzeng-customINDELC16_PLUSfunc_cdshet
0.0000
0.0000
83.3333
00010
0.0000
qzeng-customINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
25.0000
00030
0.0000