PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 298 299 300 301 302 303 304 305 306 ... 1720 1721 » 15051-15100 / 86044 show all
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	0.0000	0.0000	90.2256	0	0	0	13	4	30.7692
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	0.0000	97.7778	0	0	0	1	0	0.0000
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	0.0000	0.0000	94.2308	0	0	0	3	2	66.6667
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_gt200	*	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_gt200	het	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_51to200	het	0.0000	0.0000	50.0000	0	0	0	2	1	50.0000
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	0.0000	0.0000	80.0000	0	0	0	1	0	0.0000
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_gt200	*	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_gt200	het	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_gt200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_gt200	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	map_l125_m0_e0	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	map_l150_m0_e0	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	map_l250_m0_e0	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	map_l250_m1_e0	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	map_l250_m2_e0	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	map_l250_m2_e1	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	segdupwithalt	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	segdupwithalt	homalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	tech_badpromoters	het	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C1_5	tech_badpromoters	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	HG002compoundhet	het	0.0000	0.0000	97.7444	0	0	0	3	2	66.6667
eyeh-varpipe	INDEL	C6_15	decoy	*	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	decoy	het	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	decoy	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	decoy	homalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	func_cds	*	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	func_cds	het	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	func_cds	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	func_cds	homalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	0.0000	0.0000	97.5610	0	0	0	1	0	0.0000
eyeh-varpipe	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	0.0000	0.0000	92.3077	0	0	0	1	0	0.0000
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	0.0000	0.0000	97.3684	0	0	0	1	1	100.0000
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	0.0000	0.0000	95.2381	0	0	0	1	1	100.0000
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	0.0000	0.0000	97.5000	0	0	0	1	0	0.0000
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	0.0000		100.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge