PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
14901-14950 / 86044 show all
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
eyeh-varpipeINDEL*segdupwithalthomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
95.6522
00011
100.0000
eyeh-varpipeINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
89.0625
00076
85.7143
eyeh-varpipeINDELC16_PLUSdecoy*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSdecoyhet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSdecoyhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSdecoyhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSfunc_cds*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSfunc_cdshet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSfunc_cdshomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
98.5915
00011
100.0000
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
90.9091
00011
100.0000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
91.6667
00011
100.0000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
0.0000
0.0000
97.2222
00011
100.0000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
96.9697
00011
100.0000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
0.0000
100.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000