PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
84001-84050 / 86044 show all
ltrigg-rtg1INDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
90.9091
10100
ltrigg-rtg1INDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
95.6522
10100
ltrigg-rtg1INDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
92.4528
1201200
ltrigg-rtg1INDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
ltrigg-rtg1INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
ltrigg-rtg1INDELD1_5decoy*
100.0000
100.0000
100.0000
99.8672
40600
ltrigg-rtg1INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.8566
20400
ltrigg-rtg1INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6364
10100
ltrigg-rtg1INDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9312
10100
ltrigg-rtg1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.0265
1101100
ltrigg-rtg1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.8620
80800
ltrigg-rtg1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.3607
10100
ltrigg-rtg1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.4536
20200
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.0868
1001000
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.9614
70700
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.2456
10100
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.4505
20200
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.2973
10100
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.6667
10100
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9981
10200
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9876
10200
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
43.4783
1301300
ltrigg-rtg1INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
98.3516
30300
ltrigg-rtg1INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.6207
20200
ltrigg-rtg1INDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.9194
1301300
ltrigg-rtg1INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.8235
30200
ltrigg-rtg1INDELD1_5map_l250_m1_e0homalt
100.0000
100.0000
100.0000
93.2224
5705700
ltrigg-rtg1INDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.9691
30200
ltrigg-rtg1INDELD1_5map_l250_m2_e0homalt
100.0000
100.0000
100.0000
93.7695
6006000
ltrigg-rtg1INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.9950
30200
ltrigg-rtg1INDELD1_5map_l250_m2_e1homalt
100.0000
100.0000
100.0000
93.9394
6006000
ltrigg-rtg1INDELD1_5segduphomalt
100.0000
100.0000
100.0000
93.6879
359035600
ltrigg-rtg1INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9916
10100
ltrigg-rtg1INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9847
10100
ltrigg-rtg1INDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
33.3333
80800
ltrigg-rtg1INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
33.3333
20200
ltrigg-rtg1INDELD6_15decoy*
100.0000
100.0000
100.0000
99.8596
10100
ltrigg-rtg1INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.0385
10100
ltrigg-rtg1INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
ltrigg-rtg1INDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
52.0000
1201200
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.3636
60600
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.7742
30300
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.3077
20200
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.8261
10100
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
71.6216
4304200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.4026
40400
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.7528
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.4762
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
81.8182
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
75.0000
10100