PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83851-83900 / 86044 show all
ltrigg-rtg2INDELD6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
96.5909
60600
ltrigg-rtg2INDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
96.0784
40400
ltrigg-rtg2INDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
94.7368
20200
ltrigg-rtg2INDELD6_15map_l250_m1_e0*
100.0000
100.0000
100.0000
94.1558
1801800
ltrigg-rtg2INDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
94.1176
1101100
ltrigg-rtg2INDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.5517
20200
ltrigg-rtg2INDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
92.0635
50500
ltrigg-rtg2INDELD6_15map_l250_m2_e0*
100.0000
100.0000
100.0000
93.4659
2202300
ltrigg-rtg2INDELD6_15map_l250_m2_e0het
100.0000
100.0000
100.0000
92.9245
1401500
ltrigg-rtg2INDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.9231
20200
ltrigg-rtg2INDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
92.0000
60600
ltrigg-rtg2INDELD6_15map_l250_m2_e1*
100.0000
100.0000
100.0000
93.6639
2202300
ltrigg-rtg2INDELD6_15map_l250_m2_e1het
100.0000
100.0000
100.0000
93.1507
1401500
ltrigg-rtg2INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.9697
20200
ltrigg-rtg2INDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
92.3077
60600
ltrigg-rtg2INDELD6_15tech_badpromoters*
100.0000
100.0000
100.0000
50.0000
1701700
ltrigg-rtg2INDELD6_15tech_badpromotershet
100.0000
100.0000
100.0000
44.4444
1001000
ltrigg-rtg2INDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
66.6667
10100
ltrigg-rtg2INDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
ltrigg-rtg2INDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
66.6667
20200
ltrigg-rtg2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
72.8814
1601600
ltrigg-rtg2INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.4815
40500
ltrigg-rtg2INDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
87.5000
10100
ltrigg-rtg2INDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
55.5556
40400
ltrigg-rtg2INDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
50.0000
20200
ltrigg-rtg2INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
50.0000
20200
ltrigg-rtg2INDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
75.0000
20200
ltrigg-rtg2INDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
24.6835
119011900
ltrigg-rtg2INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9003
10100
ltrigg-rtg2INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7500
10100
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8994
10100
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7179
10100
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9942
10100
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9910
10100
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
96.0000
10200
ltrigg-rtg2INDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
96.1538
901000
ltrigg-rtg2INDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.3822
40500
ltrigg-rtg2INDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
95.4654
1701900
ltrigg-rtg2INDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.3510
30400
ltrigg-rtg2INDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
96.7320
901000
ltrigg-rtg2INDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
97.1591
901000
ltrigg-rtg2INDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
96.9274
1001100
ltrigg-rtg2INDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
94.1860
901000
ltrigg-rtg2INDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.9011
20200
ltrigg-rtg2INDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
99.0868
20200
ltrigg-rtg2INDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
99.0991
20200
ltrigg-rtg2INDELI1_5segduphetalt
100.0000
100.0000
100.0000
96.8447
4805200
ltrigg-rtg2INDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
ltrigg-rtg2INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
56.6667
1301300
ltrigg-rtg2INDELI6_15func_cdshet
100.0000
100.0000
100.0000
34.2857
2402300