PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83801-83850 / 86044 show all
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.0305
70700
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.3051
10100
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2806
20200
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.8750
10100
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.1538
10100
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9981
10200
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9884
10200
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
81.9277
1301500
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
38.0952
1301300
ltrigg-rtg2INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
98.3607
30300
ltrigg-rtg2INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.6111
20200
ltrigg-rtg2INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.8636
30200
ltrigg-rtg2INDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
99.0000
30200
ltrigg-rtg2INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
99.0244
30200
ltrigg-rtg2INDELD1_5segduphetalt
100.0000
100.0000
100.0000
96.1705
5205300
ltrigg-rtg2INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9917
10100
ltrigg-rtg2INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9858
10100
ltrigg-rtg2INDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
38.4615
80800
ltrigg-rtg2INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
33.3333
20200
ltrigg-rtg2INDELD6_15decoy*
100.0000
100.0000
100.0000
99.8573
10100
ltrigg-rtg2INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.0385
10100
ltrigg-rtg2INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
ltrigg-rtg2INDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
52.0000
1201200
ltrigg-rtg2INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.2500
60600
ltrigg-rtg2INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.9072
30300
ltrigg-rtg2INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.0000
20200
ltrigg-rtg2INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.3684
10100
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
69.7842
4304200
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.3684
40400
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8723
20200
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
51.8807
374037100
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
49.6307
343034100
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
75.0000
20200
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
66.6667
10100
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
50.0000
10100
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
77.4691
7407300
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.4784
60700
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
22.2222
2102100
ltrigg-rtg2INDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
91.7808
60600
ltrigg-rtg2INDELD6_15map_l125_m0_e0homalt
100.0000
100.0000
100.0000
86.6667
1201200
ltrigg-rtg2INDELD6_15map_l150_m0_e0*
100.0000
100.0000
100.0000
90.6158
3203200
ltrigg-rtg2INDELD6_15map_l150_m0_e0het
100.0000
100.0000
100.0000
90.1961
2002000
ltrigg-rtg2INDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
92.0635
50500
ltrigg-rtg2INDELD6_15map_l150_m0_e0homalt
100.0000
100.0000
100.0000
90.5405
70700
ltrigg-rtg2INDELD6_15map_l150_m1_e0het
100.0000
100.0000
100.0000
89.0141
3903900
ltrigg-rtg2INDELD6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
92.0000
80800
ltrigg-rtg2INDELD6_15map_l150_m2_e0het
100.0000
100.0000
100.0000
88.2507
4604500
ltrigg-rtg2INDELD6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
92.6606
80800
ltrigg-rtg2INDELD6_15map_l150_m2_e1het
100.0000
100.0000
100.0000
88.2653
4704600