PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83601-83650 / 86044 show all
asubramanian-gatkINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.4382
60600
asubramanian-gatkINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.5056
40400
asubramanian-gatkINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.1304
20200
asubramanian-gatkINDELD16_PLUSfunc_cds*
100.0000
100.0000
100.0000
82.3529
1201200
asubramanian-gatkINDELD16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
84.0000
80800
asubramanian-gatkINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
77.7778
40400
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.5560
40400
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8512
10100
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.8571
10100
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.0698
20200
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.5444
40400
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8469
10100
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
10100
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.0610
20200
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
56.7568
1201600
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
97.6636
1501500
asubramanian-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
66.6667
4504500
asubramanian-gatkINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.8947
20200
asubramanian-gatkINDELD16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
98.0861
40400
asubramanian-gatkINDELD16_PLUSmap_l125_m2_e0homalt
100.0000
100.0000
100.0000
98.3871
40400
asubramanian-gatkINDELD16_PLUSmap_l125_m2_e1homalt
100.0000
100.0000
100.0000
98.4436
40400
asubramanian-gatkINDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
98.5714
10100
asubramanian-gatkINDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
98.5714
10100
asubramanian-gatkINDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
96.7568
1201200
asubramanian-gatkINDELD1_5decoy*
100.0000
100.0000
100.0000
99.9607
40400
asubramanian-gatkINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9759
20200
asubramanian-gatkINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6183
10100
asubramanian-gatkINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9387
10100
asubramanian-gatkINDELD1_5func_cds*
100.0000
100.0000
100.0000
50.6173
159016000
asubramanian-gatkINDELD1_5func_cdshet
100.0000
100.0000
100.0000
59.8131
8508600
asubramanian-gatkINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
32.1101
7407400
asubramanian-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.8741
1101100
asubramanian-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7421
80800
asubramanian-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.2973
10100
asubramanian-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3421
20200
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.9236
1001000
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.8391
70700
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.8750
10100
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3197
20200
jli-customSNP*func_cdshetalt
100.0000
100.0000
100.0000
62.9630
1001000
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
88.6364
1501500
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
57.1429
13830138300
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.8776
30300
jli-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
88.6364
1501500
jli-customSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.6522
10100
jli-customSNP*lowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.0106
1501500