PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83301-83350 / 86044 show all
astatham-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.3816
2002000
astatham-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4222
1201200
astatham-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.7391
30300
astatham-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.5305
50500
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.4518
1701700
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4947
1001000
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.3855
30300
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.6150
40400
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.7612
30300
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.9592
20200
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
96.2963
10100
astatham-gatkINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.8842
1601600
astatham-gatkINDEL*lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.9633
2102100
astatham-gatkINDEL*map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
95.4167
1101100
astatham-gatkINDEL*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
95.0820
90900
astatham-gatkINDEL*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.0297
60600
astatham-gatkINDEL*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.5806
60600
astatham-gatkINDEL*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.6378
60600
astatham-gatkINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9974
10100
astatham-gatkINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9960
10100
astatham-gatkINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
astatham-gatkINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
3303300
astatham-gatkINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.2925
60600
astatham-gatkINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.3421
40400
astatham-gatkINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.0291
20200
astatham-gatkINDELD16_PLUSfunc_cds*
100.0000
100.0000
100.0000
80.0000
1201200
astatham-gatkINDELD16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
81.3953
80800
astatham-gatkINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
76.4706
40400
astatham-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.5460
40400
astatham-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8442
10100
astatham-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.8571
10100
astatham-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.1111
20200
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.5338
40400
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8395
10100
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
10100
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.1031
20200
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
54.2857
1201600
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
93.0233
90900
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
97.6994
1501500
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
22.8571
5105400
astatham-gatkINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
67.6259
4504500
astatham-gatkINDELD16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
90.5660
40500
astatham-gatkINDELD16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
96.5517
10100
astatham-gatkINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.7011
20200
astatham-gatkINDELD16_PLUSmap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
93.1818
30300
astatham-gatkINDELD16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
98.0583
40400
astatham-gatkINDELD16_PLUSmap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
93.6170
30300
astatham-gatkINDELD16_PLUSmap_l125_m2_e0homalt
100.0000
100.0000
100.0000
98.4127
40400
astatham-gatkINDELD16_PLUSmap_l125_m2_e1homalt
100.0000
100.0000
100.0000
98.4615
40400
astatham-gatkINDELD16_PLUSmap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
96.8750
10100