PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83251-83300 / 86044 show all
bgallagher-sentieonINDELD6_15map_l150_m0_e0het
100.0000
100.0000
100.0000
95.3271
2002000
bgallagher-sentieonINDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
90.0000
50500
bgallagher-sentieonINDELD6_15map_l150_m0_e0homalt
100.0000
100.0000
100.0000
94.8905
70700
bgallagher-sentieonINDELD6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
90.3614
80800
bgallagher-sentieonINDELD6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
91.4894
80800
bgallagher-sentieonINDELD6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
98.1595
60600
bgallagher-sentieonINDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
98.2222
40400
bgallagher-sentieonINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3684
20200
bgallagher-sentieonINDELD6_15map_l250_m1_e0*
100.0000
100.0000
100.0000
96.9595
1801800
bgallagher-sentieonINDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
97.3105
1101100
bgallagher-sentieonINDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
95.9184
20200
bgallagher-sentieonINDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
96.2687
50500
bgallagher-sentieonINDELD6_15map_l250_m2_e0*
100.0000
100.0000
100.0000
96.7742
2202200
bgallagher-sentieonINDELD6_15map_l250_m2_e0het
100.0000
100.0000
100.0000
97.0213
1401400
bgallagher-sentieonINDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.6667
20200
bgallagher-sentieonINDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
96.0526
60600
bgallagher-sentieonINDELD6_15map_l250_m2_e1*
100.0000
100.0000
100.0000
96.8571
2202200
bgallagher-sentieonINDELD6_15map_l250_m2_e1het
100.0000
100.0000
100.0000
97.1014
1401400
bgallagher-sentieonINDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.7213
20200
bgallagher-sentieonINDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
96.1538
60600
bgallagher-sentieonINDELD6_15tech_badpromoters*
100.0000
100.0000
100.0000
50.0000
1701700
bgallagher-sentieonINDELD6_15tech_badpromotershet
100.0000
100.0000
100.0000
50.0000
1001000
bgallagher-sentieonINDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
bgallagher-sentieonINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
bgallagher-sentieonINDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
62.5000
90900
bgallagher-sentieonINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
88.2353
20200
bgallagher-sentieonINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.8485
1802000
bgallagher-sentieonINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.9740
3503700
bgallagher-sentieonINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
85.5967
3503500
bgallagher-sentieonINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
100.0000
100.0000
100.0000
75.6164
8908900
bgallagher-sentieonINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
75.2336
5305300
bgallagher-sentieonINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
64.2857
2002000
bgallagher-sentieonINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
83.1579
1601600
anovak-vgINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3871
20100
anovak-vgINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9973
10100
anovak-vgINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9956
10100
anovak-vgINDELD16_PLUSmap_l250_m0_e0*
100.0000
100.0000
100.0000
98.3871
10100
anovak-vgINDELD16_PLUSmap_l250_m0_e0het
100.0000
100.0000
100.0000
97.8261
10100
anovak-vgINDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
97.1429
10100
anovak-vgINDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
97.2973
10100
anovak-vgINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9735
20200
anovak-vgINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9942
10100
anovak-vgINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9921
10100
anovak-vgINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.7213
20200
anovak-vgINDELI6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.0588
10100
anovak-vgSNPtvlowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
93.4066
60600
astatham-gatkINDEL*decoy*
100.0000
100.0000
100.0000
99.9347
1001000
astatham-gatkINDEL*decoyhet
100.0000
100.0000
100.0000
99.9426
60600
astatham-gatkINDEL*decoyhetalt
100.0000
100.0000
100.0000
99.8374
10100
astatham-gatkINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9296
30300