PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82901-82950 / 86044 show all
gduggal-snapfbINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.3333
20200
gduggal-snapfbINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
98.5635
1301300
gduggal-snapfbINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9941
10100
gduggal-snapfbINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9904
10100
gduggal-snapfbINDELD6_15decoy*
100.0000
100.0000
100.0000
99.7685
10100
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
95.5556
20200
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
100.0000
100.0000
100.0000
84.3206
4504500
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
100.0000
100.0000
100.0000
78.8889
3703800
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
100.0000
100.0000
100.0000
82.6087
1601600
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
65.8537
1301400
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
82.9787
80800
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
100.0000
100.0000
100.0000
40.0000
20300
bgallagher-sentieonINDELI16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
87.5000
10100
bgallagher-sentieonINDELI16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
83.3333
10100
bgallagher-sentieonINDELI16_PLUSmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
75.0000
10100
bgallagher-sentieonINDELI16_PLUSsegduphet
100.0000
100.0000
100.0000
96.1965
2402400
bgallagher-sentieonINDELI16_PLUSsegduphetalt
100.0000
100.0000
100.0000
97.2222
40400
bgallagher-sentieonINDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
73.3333
40400
bgallagher-sentieonINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
75.0000
20200
bgallagher-sentieonINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
bgallagher-sentieonINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
33.3333
20200
bgallagher-sentieonINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
30.4094
119011900
bgallagher-sentieonINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8621
10100
bgallagher-sentieonINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.6667
10100
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8569
10100
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.4286
10100
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9931
10100
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9830
10100
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
99.1228
10100
bgallagher-sentieonINDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
93.1298
90900
bgallagher-sentieonINDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
95.6989
40400
bgallagher-sentieonINDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
92.4107
1701700
bgallagher-sentieonINDELI1_5map_l125_m2_e0hetalt
100.0000
100.0000
100.0000
92.5490
1901900
bgallagher-sentieonINDELI1_5map_l125_m2_e1hetalt
100.0000
100.0000
100.0000
92.6923
1901900
bgallagher-sentieonINDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
95.3846
30300
bgallagher-sentieonINDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
94.5783
90900
bgallagher-sentieonINDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
95.2880
90900
bgallagher-sentieonINDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
94.9239
1001000
bgallagher-sentieonINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.6744
20200
bgallagher-sentieonINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.1308
20200
bgallagher-sentieonINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.1651
20200
bgallagher-sentieonINDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
54.1667
2202200
bgallagher-sentieonINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
46.6667
80800
bgallagher-sentieonINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
bgallagher-sentieonINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
58.0645
1301300
bgallagher-sentieonINDELI6_15func_cdshet
100.0000
100.0000
100.0000
38.4615
2402400
bgallagher-sentieonINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
71.8245
122012200
bgallagher-sentieonINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.2261
4904900
bgallagher-sentieonINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8611
20200
bgallagher-sentieonINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.3266
20200