PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82751-82800 / 86044 show all
gduggal-bwaplatINDELD16_PLUSmap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
94.1176
10100
gduggal-bwaplatINDELD16_PLUSmap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
94.1176
10100
gduggal-bwaplatINDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
96.5517
10100
gduggal-bwaplatINDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
94.1176
10100
gduggal-bwaplatINDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
96.5517
10100
gduggal-bwaplatINDELD1_5decoy*
100.0000
100.0000
100.0000
99.9770
40400
gduggal-bwaplatINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9868
20200
gduggal-bwaplatINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.8073
10100
gduggal-bwaplatINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9425
10100
gduggal-bwaplatINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7500
10100
gduggal-bwaplatINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.5294
10100
gduggal-bwaplatINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
64.8649
1301300
gduggal-bwaplatINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9958
10100
gduggal-bwaplatINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9943
10100
gduggal-bwaplatINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9649
10100
gduggal-bwaplatINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.3789
10100
gduggal-bwaplatINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
gduggal-bwaplatINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.2456
10100
gduggal-bwaplatINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
94.4444
20200
gduggal-bwaplatINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
95.2381
10100
gduggal-bwaplatINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
85.7143
10100
gduggal-bwaplatINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
75.0000
20200
gduggal-bwaplatINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9532
10100
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7342
10100
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9514
10100
gduggal-bwaplatINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.6301
10100
gduggal-bwaplatINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
75.7576
80800
gduggal-bwaplatINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
75.0000
10100
gduggal-bwaplatINDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
92.8571
10100
gduggal-bwaplatINDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
94.0000
30300
gduggal-bwaplatINDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
95.0000
30300
gduggal-bwaplatINDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
95.1613
30300
gduggal-bwaplatSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
87.5000
10100
gduggal-bwaplatSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
gduggal-bwaplatSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
77.2727
50500
gduggal-bwafbINDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
95.1220
90600
gduggal-bwafbINDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
96.5909
40300
gduggal-bwafbINDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
94.6860
1701100
gduggal-bwafbINDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.0149
30200
gduggal-bwafbINDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
95.7055
90700
gduggal-bwafbINDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
96.1957
90700
gduggal-bwafbINDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
95.7219
100800
gduggal-bwafbINDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.6000
90900
gduggal-bwafbINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.7273
20200
gduggal-bwafbINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.1651
20200
gduggal-bwafbINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.1651
20200
gduggal-bwafbINDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
53.1915
2202200
gduggal-bwafbINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
33.3333
80800
gduggal-bwafbINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
75.0000
10100