PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82601-82650 / 86044 show all
ckim-gatkINDELI1_5map_l125_m2_e1hetalt
100.0000
100.0000
100.0000
93.3333
1901900
ckim-gatkINDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
95.5224
30300
ckim-gatkINDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
95.1087
90900
ckim-gatkINDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
95.8140
90900
ckim-gatkINDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
95.4545
1001000
ckim-gatkINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.8947
20200
ckim-gatkINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.3051
20200
ckim-gatkINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.3333
20200
ckim-gatkINDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
54.1667
2202200
ckim-gatkINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
46.6667
80800
ckim-gatkINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
ckim-gatkINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
58.0645
1301300
ckim-gatkINDELI6_15func_cdshet
100.0000
100.0000
100.0000
44.1860
2402400
ckim-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
72.3982
122012200
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
86.6667
20200
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
80.0000
10100
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
83.3333
10100
eyeh-varpipeINDELD6_15map_l150_m0_e0het
100.0000
100.0000
100.0000
92.4138
2002200
eyeh-varpipeINDELD6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
97.1787
60900
eyeh-varpipeINDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
96.7532
40500
eyeh-varpipeINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.2603
20400
eyeh-varpipeINDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
95.2000
1101200
eyeh-varpipeINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.3333
60700
eyeh-varpipeINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
60.0000
20200
eyeh-varpipeINDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
88.8889
10100
eyeh-varpipeINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
62.5000
20300
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.3636
10200
eyeh-varpipeINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.1538
10200
eyeh-varpipeINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.7735
101700
eyeh-varpipeINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.0874
20300
eyeh-varpipeINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.1240
20500
eyeh-varpipeINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.2121
20500
eyeh-varpipeINDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
54.1667
2202200
eyeh-varpipeINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
40.0000
80900
eyeh-varpipeINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
75.0000
10100
eyeh-varpipeINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
58.6207
1301200
eyeh-varpipeINDELI6_15map_l150_m0_e0homalt
100.0000
100.0000
100.0000
90.5405
40700
eyeh-varpipeINDELI6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
96.4602
10400
eyeh-varpipeINDELI6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
95.8333
10200
eyeh-varpipeINDELI6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
90.3614
30800
eyeh-varpipeINDELI6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
90.1099
30900
eyeh-varpipeINDELI6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
90.2174
30900
eyeh-varpipeINDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
62.5000
30300
eyeh-varpipeSNP*func_cdshetalt
100.0000
100.0000
100.0000
57.9545
1003700
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
86.2319
101900
eyeh-varpipeSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
85.5556
101300
eyeh-varpipeSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
73.7598
1020100
eyeh-varpipeSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
57.8125
105400
eyeh-varpipeSNP*tech_badpromotershomalt
100.0000
100.0000
100.0000
48.6667
8007700
eyeh-varpipeSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
57.6923
803300