PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-score RecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
81751-81800 / 86044 show all
hfeng-pmm1SNP*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
94.0000
30300
hfeng-pmm1SNP*map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
81.3084
2002000
hfeng-pmm1SNP*map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
83.8710
2002000
hfeng-pmm1SNP*map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
83.8710
2002000
hfeng-pmm1SNP*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
93.5484
40400
hfeng-pmm1SNP*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
92.9577
50500
hfeng-pmm1SNP*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
93.0556
50500
hfeng-pmm1SNP*segduphetalt
100.0000
100.0000
100.0000
97.5610
70700
hfeng-pmm1SNP*tech_badpromotershomalt
100.0000
100.0000
100.0000
49.3671
8008000
hfeng-pmm1SNPtifunc_cdshetalt
100.0000
100.0000
100.0000
52.9412
80800
hfeng-pmm1SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
92.3567
1201200
hfeng-pmm1SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
hfeng-pmm1SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
hfeng-pmm1SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
47.9369
858085800
hfeng-pmm1SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.4444
10100
hfeng-pmm1SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.7500
10100
hfeng-pmm1SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
95.8333
20200
hfeng-pmm1SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
92.3567
1201200
hfeng-pmm1SNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.0000
10100
hfeng-pmm1SNPtilowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.6667
60600
hfeng-pmm1SNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
80.0000
20200
hfeng-pmm1SNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
100.0000
100.0000
100.0000
36.5834
39870398700
hfeng-pmm1SNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.2963
20200
hfeng-pmm1SNPtimap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
74.5455
1401400
hfeng-pmm1SNPtimap_l100_m1_e0hetalt
100.0000
100.0000
100.0000
73.6364
2902900
hfeng-pmm1SNPtimap_l100_m2_e0hetalt
100.0000
100.0000
100.0000
75.6098
3003000
hfeng-pmm1SNPtimap_l100_m2_e1hetalt
100.0000
100.0000
100.0000
75.0000
3103100
hfeng-pmm1SNPtimap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
80.0000
80800
hfeng-pmm1SNPtimap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
71.0843
2402400
hfeng-pmm1SNPtimap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
75.7576
2402400
hfeng-pmm1SNPtimap_l125_m2_e1hetalt
100.0000
100.0000
100.0000
75.7576
2402400
hfeng-pmm1SNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
90.3226
30300
hfeng-pmm1SNPtimap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
76.5625
1501500
hfeng-pmm1SNPtimap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
79.7297
1501500
hfeng-pmm1SNPtimap_l150_m2_e1hetalt
100.0000
100.0000
100.0000
79.7297
1501500
hfeng-pmm1SNPtimap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
88.8889
40400
hfeng-pmm1SNPtimap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
87.5000
50500
hfeng-pmm1SNPtimap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
87.8049
50500
hfeng-pmm1SNPtisegduphetalt
100.0000
100.0000
100.0000
98.8889
20200
hfeng-pmm1SNPtitech_badpromotershomalt
100.0000
100.0000
100.0000
42.2535
4104100
hfeng-pmm1SNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
62.9630
1001000
hfeng-pmm1SNPtvfunc_cdshomalt
100.0000
100.0000
100.0000
25.9774
17040170400
hfeng-pmm1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
94.0945
1501500
hfeng-pmm1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
53.3915
481048100
hfeng-pmm1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
88.8889
10100
hfeng-pmm1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
62.7135
786078600
hfeng-pmm1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
hfeng-pmm1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
67.7914
525052500
hfeng-pmm1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
20200
hfeng-pmm1SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200