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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1580 1581 1582 1583 1584 1585 1586 1587 1588 ... 1720 1721 » 79151-79200 / 86044 show all
dgrover-gatk	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	*	99.7832	99.7317	99.8347	68.1691	9666	26	9666	16	12	75.0000
hfeng-pmm1	SNP	ti	map_l150_m2_e0	homalt	99.7833	99.7637	99.8030	73.2106	7598	18	7598	15	6	40.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.7833	99.8915	99.6753	78.2895	921	1	921	3	2	66.6667
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.7835	99.7835	99.7835	59.1512	461	1	461	1	1	100.0000
jli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.7835	99.7835	99.7835	58.0762	461	1	461	1	1	100.0000
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.7835	99.7835	99.7835	62.5000	461	1	461	1	1	100.0000
ndellapenna-hhga	SNP	*	map_l100_m2_e0	homalt	99.7835	99.6512	99.9162	62.4810	27427	96	27427	23	21	91.3043
ltrigg-rtg2	SNP	tv	map_l125_m2_e0	homalt	99.7836	99.6344	99.9333	66.1132	5995	22	5996	4	3	75.0000
raldana-dualsentieon	SNP	tv	map_l125_m2_e0	homalt	99.7837	99.6676	99.9000	65.8746	5997	20	5997	6	3	50.0000
ckim-dragen	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7838	99.7565	99.8111	59.5001	16389	40	16384	31	5	16.1290
cchapple-custom	SNP	*	HG002complexvar	het	99.7839	99.6872	99.8808	18.7433	464041	1456	463256	553	394	71.2477
ltrigg-rtg1	SNP	*	map_l125_m2_e0	homalt	99.7839	99.6604	99.9077	68.1589	17316	59	17317	16	16	100.0000
eyeh-varpipe	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.7839	99.8029	99.7650	51.9403	6076	12	5943	14	7	50.0000
jli-custom	SNP	tv	map_l100_m1_e0	homalt	99.7840	99.6351	99.9335	58.3614	9010	33	9010	6	5	83.3333
jli-custom	INDEL	D1_5	*	het	99.7840	99.7088	99.8593	56.7542	87319	255	87313	123	65	52.8455
hfeng-pmm2	SNP	tv	map_l125_m2_e0	homalt	99.7840	99.8006	99.7674	69.8673	6005	12	6005	14	5	35.7143
ltrigg-rtg2	SNP	tv	map_l150_m1_e0	homalt	99.7842	99.6199	99.9492	67.6001	3931	15	3932	2	1	50.0000
ckim-gatk	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.7843	99.6517	99.9173	61.4911	10873	38	10869	9	5	55.5556
egarrison-hhga	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.7844	99.6701	99.8990	60.1508	10875	36	10875	11	9	81.8182
jli-custom	SNP	tv	map_l100_m2_e1	homalt	99.7847	99.6345	99.9353	60.9647	9268	34	9268	6	5	83.3333
eyeh-varpipe	SNP	tv	HG002complexvar	*	99.7847	99.8883	99.6813	20.5762	245880	275	235205	752	120	15.9574
bgallagher-sentieon	SNP	tv	map_l100_m2_e1	homalt	99.7847	99.6667	99.9030	61.6624	9271	31	9271	9	6	66.6667
ndellapenna-hhga	SNP	*	map_l100_m1_e0	homalt	99.7849	99.6482	99.9220	59.8338	26908	95	26908	21	19	90.4762
egarrison-hhga	SNP	ti	map_l150_m2_e1	homalt	99.7853	99.6620	99.9088	73.2343	7667	26	7667	7	7	100.0000
cchapple-custom	SNP	*	func_cds	*	99.7855	99.9174	99.6539	26.7611	18135	15	18142	63	1	1.5873
hfeng-pmm1	SNP	ti	map_l150_m2_e1	homalt	99.7855	99.7660	99.8049	73.2531	7675	18	7675	15	6	40.0000
ndellapenna-hhga	SNP	*	map_l100_m2_e1	homalt	99.7857	99.6546	99.9170	62.4746	27700	96	27700	23	21	91.3043
ltrigg-rtg2	SNP	tv	map_l125_m2_e1	homalt	99.7857	99.6378	99.9340	66.1624	6052	22	6058	4	3	75.0000
raldana-dualsentieon	SNP	tv	map_l125_m2_e1	homalt	99.7857	99.6707	99.9010	65.8803	6054	20	6054	6	3	50.0000
ckim-dragen	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.7859	99.8680	99.7039	39.7224	18159	24	18186	54	6	11.1111
ltrigg-rtg1	SNP	*	map_l125_m2_e1	homalt	99.7859	99.6635	99.9086	68.1960	17473	59	17480	16	16	100.0000
hfeng-pmm2	SNP	tv	map_l125_m2_e1	homalt	99.7860	99.8024	99.7696	69.9104	6062	12	6062	14	5	35.7143
egarrison-hhga	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7861	99.6723	99.9000	60.2486	6996	23	6996	7	5	71.4286
dgrover-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	het	99.7862	99.5733	100.0000	46.7275	700	3	700	0	0
ltrigg-rtg2	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	het	99.7862	99.5733	100.0000	36.3469	700	3	690	0	0
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.7863	99.5736	100.0000	84.3551	467	2	467	0	0
egarrison-hhga	SNP	tv	map_l125_m1_e0	homalt	99.7864	99.6587	99.9145	66.8895	5840	20	5840	5	5	100.0000
raldana-dualsentieon	SNP	tv	map_l125_m1_e0	homalt	99.7865	99.6758	99.8974	63.2172	5841	19	5841	6	3	50.0000
ltrigg-rtg2	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.7866	99.5939	99.9801	57.0879	10056	41	10036	2	2	100.0000
hfeng-pmm3	INDEL	I1_5	*	homalt	99.7866	99.8014	99.7717	52.1729	60308	120	60313	138	134	97.1014
hfeng-pmm1	SNP	tv	map_l125_m1_e0	homalt	99.7867	99.7952	99.7782	67.3918	5848	12	5848	13	5	38.4615
hfeng-pmm1	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.7867	99.6017	99.9723	54.3769	25258	101	25260	7	3	42.8571
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.7868	99.6845	99.8894	55.8752	25279	80	25282	28	15	53.5714
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.7868	99.5745	100.0000	69.2913	468	2	468	0	0
gduggal-bwafb	SNP	tv	HG002complexvar	*	99.7871	99.7453	99.8289	23.3366	245528	627	245605	421	174	41.3302
ckim-gatk	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.7872	99.6565	99.9183	57.2121	17118	59	17114	14	8	57.1429
egarrison-hhga	SNP	*	HG002complexvar	het	99.7873	99.6172	99.9580	18.3902	463715	1782	463738	195	79	40.5128
hfeng-pmm3	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7876	99.5850	99.9909	55.4353	11038	46	11035	1	0	0.0000
bgallagher-sentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.7876	99.6312	99.9445	71.5069	5403	20	5403	3	3	100.0000
bgallagher-sentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.7876	99.6312	99.9445	71.5069	5403	20	5403	3	3	100.0000

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