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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1560 1561 1562 1563 1564 1565 1566 1567 1568 ... 1720 1721 » 78151-78200 / 86044 show all
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.6750	99.5671	99.7831	28.3048	460	2	460	1	1	100.0000
dgrover-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.6750	99.5671	99.7831	29.8326	460	2	460	1	1	100.0000
eyeh-varpipe	SNP	*	map_l100_m2_e0	hetalt	99.6753	100.0000	99.3528	67.7116	42	0	307	2	1	50.0000
hfeng-pmm2	SNP	ti	segdup	*	99.6754	99.8157	99.5355	89.6871	19501	36	19499	91	9	9.8901
hfeng-pmm3	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.6756	99.3855	99.9675	53.7536	6146	38	6146	2	0	0.0000
bgallagher-sentieon	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	het	99.6756	99.9350	99.4176	34.7502	4613	3	4609	27	2	7.4074
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.6757	99.7835	99.5680	64.0528	461	1	461	2	2	100.0000
ckim-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6757	100.0000	99.3534	78.2160	922	0	922	6	3	50.0000
hfeng-pmm3	SNP	ti	map_l100_m2_e0	*	99.6760	99.5874	99.7647	64.5930	48759	202	48752	115	21	18.2609
ckim-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6761	99.8558	99.4971	65.7565	1385	2	1385	7	0	0.0000
hfeng-pmm2	SNP	*	segdup	*	99.6762	99.8147	99.5380	90.2632	28015	52	28009	130	13	10.0000
hfeng-pmm2	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	39.9610	308	2	308	0	0
hfeng-pmm2	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	39.9610	308	2	308	0	0
hfeng-pmm3	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	37.5254	308	2	308	0	0
hfeng-pmm3	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	37.5254	308	2	308	0	0
jli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6764	99.3548	100.0000	82.9268	154	1	154	0	0
jli-custom	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	36.8852	308	2	308	0	0
hfeng-pmm1	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	39.1304	308	2	308	0	0
hfeng-pmm1	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	39.1304	308	2	308	0	0
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6764	99.6119	99.7409	78.6563	770	3	770	2	0	0.0000
ndellapenna-hhga	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	het	99.6764	99.4350	99.9189	28.6252	2464	14	2464	2	0	0.0000
bgallagher-sentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6764	99.6119	99.7409	78.2474	770	3	770	2	0	0.0000
bgallagher-sentieon	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
bgallagher-sentieon	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
bgallagher-sentieon	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	het	99.6764	99.7409	99.6119	68.7361	3080	8	3080	12	9	75.0000
astatham-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6764	99.6119	99.7409	78.4116	770	3	770	2	0	0.0000
astatham-gatk	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
asubramanian-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.6764	99.3548	100.0000	84.7525	154	1	154	0	0
astatham-gatk	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
jli-custom	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	36.8852	308	2	308	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6764	99.6119	99.7409	78.6681	770	3	770	2	0	0.0000
ckim-vqsr	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6764	99.6119	99.7409	78.6563	770	3	770	2	0	0.0000
dgrover-gatk	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	36.3636	308	2	308	0	0
dgrover-gatk	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	36.3636	308	2	308	0	0
dgrover-gatk	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	het	99.6764	99.7409	99.6119	69.3315	3080	8	3080	12	9	75.0000
dgrover-gatk	SNP	ti	map_siren	*	99.6765	99.6403	99.7128	55.1320	99994	361	99979	288	68	23.6111
ndellapenna-hhga	SNP	*	map_l100_m0_e0	homalt	99.6765	99.4406	99.9135	60.1441	11555	65	11555	10	8	80.0000
ltrigg-rtg2	SNP	tv	segdup	homalt	99.6765	99.9382	99.4161	89.5171	3236	2	3235	19	19	100.0000
hfeng-pmm2	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	het	99.6765	99.4754	99.8784	28.4513	2465	13	2464	3	0	0.0000
ltrigg-rtg1	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.6765	99.9590	99.3956	49.5528	2438	1	2467	15	0	0.0000
ltrigg-rtg1	SNP	tv	segdup	homalt	99.6765	99.9382	99.4161	89.9204	3236	2	3235	19	19	100.0000
ckim-vqsr	INDEL	D1_5	HG002complexvar	het	99.6767	99.4799	99.8743	56.3731	20657	108	20661	26	12	46.1538
ckim-dragen	SNP	tv	map_l100_m2_e1	homalt	99.6770	99.5162	99.8382	60.2316	9257	45	9257	15	13	86.6667
hfeng-pmm3	SNP	ti	map_l100_m2_e1	*	99.6774	99.5898	99.7651	64.5884	49282	203	49275	116	21	18.1034
gduggal-snapfb	SNP	ti	func_cds	het	99.6775	99.9530	99.4036	28.0582	8500	4	8500	51	1	1.9608
jli-custom	SNP	ti	map_l100_m0_e0	homalt	99.6776	99.4340	99.9224	57.9039	7730	44	7730	6	6	100.0000
eyeh-varpipe	SNP	*	map_l250_m0_e0	homalt	99.6776	99.6820	99.6732	93.5320	627	2	610	2	2	100.0000
ckim-dragen	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.6778	99.6209	99.7347	74.4322	33110	126	33088	88	54	61.3636
dgrover-gatk	SNP	ti	segdup	*	99.6780	99.8413	99.5153	89.9275	19506	31	19504	95	6	6.3158
hfeng-pmm2	SNP	tv	segdup	*	99.6780	99.8125	99.5439	91.3819	8516	16	8512	39	4	10.2564

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